Legionella oakridgensis: Loa_02239
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Entry
Loa_02239 CDS
T03928
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lok
Legionella oakridgensis
Pathway
lok03420
Nucleotide excision repair
lok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Loa_02239
03430 Mismatch repair
Loa_02239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lok03400
]
Loa_02239
Enzymes [BR:
lok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Loa_02239
DNA repair and recombination proteins [BR:
lok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Loa_02239
MMR (mismatch excision repair)
Other MMR factors
Loa_02239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHE67781
UniProt:
W0BGH6
LinkDB
All DBs
Position
complement(2065784..2067934)
Genome browser
AA seq
716 aa
AA seq
DB search
MTAWLQGLNEYQRRAVTAPLGNVLVLAGAGSGKTRVLVNRMAWLIEQESISPHAILAVTF
TNKAAGEMKSRLSHLLSCPVQGLWVGTFHGLCHRLLRRHYQEANLPEQFHILDSDDQARL
LKRVITSLNLDVEQWPVKQAQLFINGKKDEGLRPQHIHVPQYGPGRTLVRIYAAYEQACQ
TAGVIDFAELLLRCHELLRDHEVLLAHYQQRFRAILVDEFQDTNTIQYAWIRLLAGNQAA
VMAVGDDDQSIYGWRGAKIENIQRFAHDFADTKVIRLEQNYRSTSTILDAANALITHNQS
RMGKNLWTAGQAGEKITVYSAFNELEEARFVSDRIGLEINRGRRADEMAVLYRSNAQSRL
LEESLLRAGIPYRIYGGVRFFERAEVKDTLAYLRLIANPDDDASFERVVNFPTRGIGEKT
LDDLRTYARDASCSLWHAAQQLLSSQQLPQRASAALSKFVGLIRQLQVSTLTLTLDEQIW
KIIQDSGLYDHFAKIKGDKSESRLDNLQELVNAAKQFRYEQDVEEEWPLLVSFLAYASLE
AGEMQGGEHEHCVHLMTLHAAKGLEFPLVFLVGMEEGLFPGKQSIEEPGRLEEERRLCYV
GMTRSMEKLIMTYAEVRRQYGREEYHRPSRFLRELPAELLDEVRPKAHYQFPAPNNKVPS
AAEEAGLKLGQSVHHVKFGHGVVLAVEGSGAHTRVQVKFAEHGMKWLVLAYANLTL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttggttgcaggggcttaatgaataccaacgccgtgctgtgacggcaccactg
ggtaatgtgctggtgctcgctggcgcaggcagtggtaaaacacgagtattggttaatcgc
atggcttggctaatcgagcaggaatccatttcaccccatgctattcttgctgtaacgttt
accaataaagcggcaggagagatgaagtctcgtttgagtcatttgctgtcttgtccggtg
caaggattatgggtaggtacctttcatggtttgtgtcatcgtttgttaagacgacattat
caggaagcgaatttaccagaacagttccatattcttgacagcgatgaccaggcacgcttg
ctcaaacgcgtcatcacttctttaaatcttgatgttgagcaatggccggttaaacaagcg
caactgtttattaatggtaaaaaagatgaaggcctgcgtccgcagcatattcatgtgcct
cagtatgggccaggccgtaccttggttcgtatttatgctgcttatgaacaggcgtgccag
acggcgggcgtgattgattttgctgaattgttattgcggtgccatgaattgcttcgcgat
catgaagtattgcttgctcattaccagcagcgctttcgcgcaattcttgtggatgagttt
caggataccaataccatacaatatgcctggattcgcctgttggctggaaatcaagcggct
gtgatggcggttggcgatgatgatcaatccatttatggctggcggggtgcaaaaatagaa
aacattcagcgctttgcccatgattttgcagacacgaaggtaattcggcttgagcaaaat
tatcgttcaaccagcaccattcttgatgcagcaaatgcgttgattacgcacaatcaatcg
cgtatgggaaagaatttatggacagccgggcaggctggcgaaaaaattacggtttacagt
gcctttaatgaacttgaggaggcaaggtttgtaagcgatcgtattggtctggaaataaat
cgtgggcggcgtgctgatgaaatggctgttttatatcgttctaatgcgcaatcacggtta
ttagaagaatctttattacgtgctggcattccttatcgcatctatggtggcgtacgtttt
tttgagcgagctgaagtaaaagatacgctggcctatttgcggctgattgctaatccggat
gatgatgcttcctttgagcgagtggttaatttccccactcgtggtattggtgaaaaaacc
ttggatgatttgcgtacgtatgccagggatgcatcttgttctctttggcatgcggcccag
caattgctttcctcacagcaattgccacaacgtgcctctgcagcattatccaaatttgta
ggtttaattcgacaattgcaagtcagtacactgacgttaacgctggatgaacaaatttgg
aaaatcattcaagacagtggcttatatgaccatttcgccaaaataaaaggtgataagtcg
gaatccagactggataatttgcaagaattggtgaatgctgccaagcaatttcgttatgag
caggatgtagaagaagagtggccgttgctggtgtcgtttttagcgtatgcttcactggag
gctggtgaaatgcaaggaggggagcatgagcattgcgtgcatttgatgacgctgcatgca
gccaaaggacttgagtttcctcttgtctttcttgtggggatggaggaaggcttatttccg
ggtaaacaatccattgaagagccaggtcgacttgaagaggagcgcaggctttgttacgta
ggcatgaccaggtcgatggaaaaactcattatgacgtacgctgaggtccgccgccaatac
ggccgggaagagtatcatcggccctctcgttttttaagagagttgccggcggagttgttg
gatgaagtacgtcccaaagcccattatcaatttcctgccccaaacaacaaggtgccttct
gcggctgaggaagctgggcttaagctcgggcaatcggttcatcacgtaaaatttgggcat
ggagttgtattggctgtagagggtagtggtgctcatacacgcgtgcaagtcaaatttgct
gagcatggcatgaagtggctggtgttggcttatgccaatttaactttgtaa
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