Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_01060
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Entry
Lokiarch_01060 CDS
T04015
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lokiarch_01060 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loki03021
]
Lokiarch_01060 (rpoD)
Enzymes [BR:
loki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lokiarch_01060 (rpoD)
Transcription machinery [BR:
loki03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Lokiarch_01060 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4
Fer4_6
Fer4_9
Fer4_2
Fer4_21
Fer4_16
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
KKK46447
UniProt:
A0A0F8VQ81
LinkDB
All DBs
AA seq
277 aa
AA seq
DB search
MDINVLEKTDHKLVFVVENVSLDMINSIRRIIVSEVPVMAVDEVIILKNDSPLYDEIVSH
RLGMIPLTTDLEAYKLPRECSCDGYGCSLCQVSLTCEVTNTTNTPLEIYSGDLKSNDPEI
MPVDPNIPIVKIDKNNQLILEAYAILGIAKDHVKWQAVSNIFYRFYPEIEFEASKCVKCK
EKCVISKLCPERLFTFTDGKSPKLQEESWKSCTLCKSCEKNCPENAVKIGTKANSYIFSI
ESDGVLPFRVVFKKSFEIFLEKIDEFVERLEGIELES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggacattaatgttcttgaaaaaaccgatcataaattagtatttgtagttgaaaatgtt
tccttggatatgattaattctatcaggaggataatagtttcagaggttcccgttatggcg
gtcgatgaggtaattatattaaagaatgatagtccactttatgatgaaatagttagccat
cgtttaggaatgatccctttaacaacagatttggaggcatataaactaccacgcgaatgt
agttgtgatggatacggatgtagtttatgtcaggtttcattaacttgtgaagtaacgaat
acaacgaatacacccttagaaatttattcaggggatttaaaatcaaacgatccagaaata
atgccagttgatccaaatatacctattgttaaaatagataagaataatcagttaatctta
gaagcatatgctatactaggcattgctaaggatcatgttaaatggcaagctgtttctaac
atattctatagattttatcccgaaatagaatttgaagcctctaaatgtgttaaatgcaaa
gaaaagtgtgtaatatcgaaattatgtcctgaaaggttatttacatttacagatgggaaa
tcacctaaattacaggaagaatcatggaagagttgcactttatgtaaatcctgcgaaaaa
aattgtccagaaaatgctgtaaaaattggaactaaagctaattcttatattttttcaatc
gaaagcgacggagttttgccatttagggtagtatttaaaaaatcattcgaaatattcttg
gaaaaaatagatgaatttgttgaaagacttgaaggaatcgagttagaatcatga
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