Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_03360
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Entry
Lokiarch_03360 CDS
T04015
Symbol
truB_1
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loki03016
]
Lokiarch_03360 (truB_1)
Enzymes [BR:
loki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Lokiarch_03360 (truB_1)
Transfer RNA biogenesis [BR:
loki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lokiarch_03360 (truB_1)
Prokaryotic type
Lokiarch_03360 (truB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PUA
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
KKK46194
LinkDB
All DBs
AA seq
334 aa
AA seq
DB search
MELSEFKLPSDEPEQLLVKSQDVTKPIYGSEPDKRSIEKLLQYGVINLDKPSGPTSHEVV
SWVRKVLGITNAGHGGTLDPKVTGILPCGLGRATRALSALLNAGKEYIGVLYLHSPEELT
RVEKIFKLFTGKIYQRPPIKSSVARRLRTREIYYSKVIEMKGNHVLFRIGCEAGTYIRKF
CFDIGEALCSGAHMLELRRTKVGKFTESSNLATLQNLKDAYTIYQMEGNDYYLRKILFPM
EKMVSHLPKIYIRDTAVDAICHGADLASAGVCFVDARIKPNMMVALMTLKKELIGFGTSL
KNAMQIYKAKSGILVKTKKIFMERGIYPRWDERK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaactttcagaattcaaattaccttctgatgaacctgaacaacttttggtaaagtct
caagatgtaactaaaccaatttatggatctgagcctgataaaaggagtatagaaaaactt
cttcaatatggagtaataaatttagataaaccgagtggtccaactagtcacgaagttgtc
tcttgggttcgtaaggtattggggatcaccaatgcaggacatggtggtactttagatcct
aaagttacagggatattaccatgtggtcttggaagagcaacgcgagctttatctgcatta
ttgaatgcaggtaaagaatatattggagtattatatttacattcaccagaggaattaacg
agagttgaaaaaatattcaaattgtttactggaaaaatttatcagagacctcctataaag
tcatcagttgctagaagattaagaaccagagaaatttattacagcaaagttattgaaatg
aagggaaaccatgttctctttagaataggatgtgaggcaggaacttacatccgaaagttt
tgtttcgatattggagaagcgttatgttcaggagctcacatgctagaattaagaaggact
aaggtgggtaaatttactgaaagctcaaacttagccactctccaaaatttaaaagatgcc
tatactatatatcaaatggaaggtaacgattattatttgaggaaaattctgtttcccatg
gaaaaaatggtttctcatctcccaaagatttatatccgagacacagctgttgatgcaata
tgccatggtgcggatttagcttcagctggtgtttgttttgttgatgcgagaataaaacct
aacatgatggtggccttaatgacgttgaaaaaagaactaattggatttggtacctcatta
aaaaacgcaatgcagatctataaagccaagtcaggaatattagtaaaaacgaaaaaaata
ttcatggaaagaggaatctatccaagatgggatgaaaggaaatag
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