Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_24950
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Entry
Lokiarch_24950 CDS
T04015
Symbol
rpoA1_1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lokiarch_24950 (rpoA1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loki03021
]
Lokiarch_24950 (rpoA1_1)
Enzymes [BR:
loki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lokiarch_24950 (rpoA1_1)
Transcription machinery [BR:
loki03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Lokiarch_24950 (rpoA1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
KKK43677
UniProt:
A0A0F8VH35
LinkDB
All DBs
AA seq
853 aa
AA seq
DB search
MSYTFSRTKMIEKIKFGLLSPNEIRKMSAARIITADTYDEDGLPIPSGLMDQRLGTIEPG
QRCQTCGNLVSNCMGHFGHIELARPVIHVGYAKKVLKVLRSICPECSKLMLTLEEKEKFR
LEQIEHRKIFFEGDDDASKIVFKQARKAKSCPFCNAKNKKIVIEKPTTFYEEEEGKGSRR
ITPIEIVERLKKMSDLDLRILGISPENARLEWVIFSVLPIPPVCARPSITLDSGIRSEDD
LTHKLVDVIRINQRLRENIDAGAPHLIVEDLWELLQYHITTYFDNQVSGIPPARHRSGRA
LRTLTQRLKGKEGRFRSNLSGKRVDFSARSVISPNPYISINDVGVPVEIAKILTIPTNIN
DWNIEEMKQLILNGPFHHPGANYIIRTDRRRIDLRYVKNRKIIADMLAPGFTVERHLNEG
DLVLFNRQPSLHRMSIMAHEVRIMDGRTFRLNLTVCPPYNADFDGDEMNLHVPQSEEART
EAELLLKVQNHILSPRFGGPILGGIQDFISSVFQFTSKDSVYTKNETLQLLYLGDIFINN
PSFGLEHISPVSDGPNPMYSGKDIFSSLFPDDLNLKVKSKFCKKCDVCKEDNCEYDAYVV
ITNGRLLTGTIDENSYGAMQPNSILARIIKDHGNARGRQFLDSSTKMLLYVIRKNGITMG
LDEVYVHGPAYEVIEKILKDANDESEKLIKAFDENDTTILKRAPGRSMRETLELRIRQEL
AEARKKAEESAADFIGDEAHSVIMTKSGARGNILNLGQMSAVVGQQAIRGERINRGYSNR
TLPHFKVHDLSPKSRGFVSSSYRNGLKPVEFFFHAMGGREGLVDTAVRTSTSGYMQRRLV
NALQDMVVENDGT
NT seq
2558 nt
NT seq
+upstream
nt +downstream
nt
atgagttatactttttcaagaactaaaatgatagaaaaaatcaagtttggacttcttagc
ccgaatgagattcgcaaaatgtctgctgctcgtattattacagcggatacttatgatgaa
gatggtttacctatcccctctggattaatggaccaacgattgggaactattgaaccaggt
caacgttgccagacttgtggtaatcttgtcagtaattgcatgggtcattttgggcatatt
gaacttgcgcgaccagtaattcatgtgggttatgcgaaaaaagtattaaaagttttaaga
agcatatgtcctgaatgctccaaattaatgctcacactcgaggaaaaagagaagtttaga
ctggaacaaattgaacacagaaagattttttttgagggagatgatgatgcttcgaagatt
gttttcaaacaggcaagaaaagcgaaatcttgccctttttgtaatgctaagaataaaaag
attgtaattgagaaacctactacattttatgaggaggaagaagggaaaggttcgcggaga
ataactcccattgaaatcgtagaacgcctaaaaaaaatgagtgatctcgatctaagaatt
ttaggcatctcacctgaaaacgctagacttgagtgggttattttttctgtactccctatc
cctcctgtatgtgcaagaccttcgatcacattagatagcggcattaggtccgaggatgat
ttaacacataagttagtggatgtaatccgtataaatcaaagattgagagaaaatatagat
gctggtgccccacatttaattgtggaagatctctgggaacttctccagtatcatattact
acttattttgataatcaggtttcagggattccccctgctagacatcgttcgggtcgagcc
cttagaacgttgactcaaagattaaaaggtaaagaagggagattcagaagtaatttaagt
gggaaaagagttgatttttccgcaagaagtgtgatctcaccaaatccttatattagcatt
aatgacgttggtgtaccagtggagattgcgaaaattcttacaatacctacaaatattaac
gattggaacattgaagaaatgaagcagttaattttaaatggtcctttccatcacccagga
gcaaattatatcatacgtaccgatcgcagacgaattgatttacgttatgttaaaaatcgg
aagataattgcagacatgttagccccgggatttacggttgaacgtcatctaaatgaagga
gatttagttctattcaaccgtcaaccatcacttcatagaatgtcgataatggcgcatgaa
gtacgaataatggacggaagaacttttcgattaaacttaactgtttgtccaccttataat
gcagattttgacggagatgaaatgaatctacacgtaccgcaaagtgaagaagctcgaaca
gaagcagaactactccttaaagtacaaaatcatatcttatctcctcggtttggagggcct
attttaggaggaattcaagactttatttcaagtgtctttcaattcacaagtaaagattct
gtatatactaaaaatgaaacattacaattgttgtatcttggagatatttttatcaacaac
ccctcttttggtttagaacatatttctcccgtatctgatggcccaaatcctatgtattcg
gggaaagatattttcagtagtttatttcccgatgatctaaatttaaaagttaaatcaaaa
ttctgtaagaaatgtgatgtatgtaaagaagataactgtgaatacgatgcttatgtagta
ataacaaatggtagattgctcactgggacgattgatgaaaattcatatggagcaatgcaa
ccaaatagcatactggcaagaataattaaggatcacggaaatgcgagaggtcggcaattt
ttagacagttccactaaaatgctattatatgttattaggaaaaatggcataaccatggga
ttggatgaagtttatgtgcatgggcctgcatatgaagttattgagaaaatactcaaagat
gcaaatgatgaatccgaaaaactgataaaagcctttgatgaaaatgatacaactattctt
aaacgagcacctggtcgttcaatgagagaaaccttagaattaagaatacggcaagaatta
gctgaagcccgtaaaaaggcagaagaatctgcagcagattttattggagatgaggcacat
tcagttattatgactaaatctggagctcgaggaaatatattaaatcttggacaaatgtcc
gcggttgtgggtcagcaggctataagaggtgaaaggattaatagaggctatagtaacaga
actctacctcattttaaagttcacgatctttctcccaaatcaagaggttttgtatcatct
tcttaccggaatggattaaaaccagttgaatttttctttcacgctatgggcggaagagag
ggtttggttgatacagcagtaagaacatctactagtggatatatgcaacgtaggttagta
aatgctttacaagatatggttgtagaaaatgatggaac
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