Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_28510
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Entry
Lokiarch_28510 CDS
T04015
Symbol
csl4
Name
(GenBank) Exosome complex component Csl4
KO
K07573
exosome complex component CSL4
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lokiarch_28510 (csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loki03019
]
Lokiarch_28510 (csl4)
Messenger RNA biogenesis [BR:
loki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Lokiarch_28510 (csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Lokiarch_28510 (csl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_RRP5_4th
S1
ECR1_N
zf-FPG_IleRS
Zn_ribbon_PaaD
DUF1451
Zn_ribbon_8
HypA
TackOD1
Zn_ribbon_NOB1
HVO_2753_ZBP
Zn_ribbon_IS1595
zf-C2H2_FBX41
DmmA-like_C
Ribosomal_L37e
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
KKK43256
UniProt:
A0A0F8Y4P9
LinkDB
All DBs
AA seq
200 aa
AA seq
DB search
MKKSEKKIHKDLVFTGEYLGVVEEFLPDKKSTFIQDGQIFATISGILNIDEAKRELEILD
DEADNRKLIKVGDIVLGVILFIRQYSVGLHFYAVNNKIHFNSNYFGNIHVSEISDRYVEK
IQDAFQKTDIIRARVIKLQYNEFDLSTSGKNLGVVHADCVVCGTTLKKINFNKLQCPRCG
STETRKLTEDYGNITENLRF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagagaaaaaaattcacaaagatcttgttttcacgggagagtatttggga
gttgttgaagagttccttcctgacaaaaaatctacatttatacaagatgggcaaattttt
gcaactatatcaggtatccttaatatagatgaagcgaaacgagaattagagatccttgat
gacgaagcagataatagaaaattaataaaagtaggagatattgttctcggggtaatccta
tttatccgacaatattctgttggcctacatttttatgctgtaaataataaaattcatttc
aattcaaattattttgggaatatacacgtatcagaaatttctgatagatatgttgaaaaa
attcaagatgcctttcaaaaaactgatattatacgagctcgtgtgattaaactccaatat
aatgaatttgatctaagtacatcaggtaaaaatcttggtgttgttcatgctgattgtgtg
gtttgtggaactactctaaagaaaattaattttaataagttacaatgcccacgttgcggg
agcacggaaactagaaaactcactgaagattatggaaacataaccgagaatctaagattt
taa
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