KEGG   Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_28510
Entry
Lokiarch_28510    CDS       T04015                                 
Symbol
csl4
Name
(GenBank) Exosome complex component Csl4
  KO
K07573  exosome complex component CSL4
Organism
loki  Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:loki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lokiarch_28510 (csl4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loki03019]
    Lokiarch_28510 (csl4)
Messenger RNA biogenesis [BR:loki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Lokiarch_28510 (csl4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Lokiarch_28510 (csl4)
SSDB
Motif
Pfam: OB_RRP5_4th S1 ECR1_N zf-FPG_IleRS Zn_ribbon_PaaD DUF1451 Zn_ribbon_8 HypA TackOD1 Zn_ribbon_NOB1 HVO_2753_ZBP Zn_ribbon_IS1595 zf-C2H2_FBX41 DmmA-like_C Ribosomal_L37e Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: KKK43256
UniProt: A0A0F8Y4P9
LinkDB
AA seq 200 aa
MKKSEKKIHKDLVFTGEYLGVVEEFLPDKKSTFIQDGQIFATISGILNIDEAKRELEILD
DEADNRKLIKVGDIVLGVILFIRQYSVGLHFYAVNNKIHFNSNYFGNIHVSEISDRYVEK
IQDAFQKTDIIRARVIKLQYNEFDLSTSGKNLGVVHADCVVCGTTLKKINFNKLQCPRCG
STETRKLTEDYGNITENLRF
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaaaaaatcagagaaaaaaattcacaaagatcttgttttcacgggagagtatttggga
gttgttgaagagttccttcctgacaaaaaatctacatttatacaagatgggcaaattttt
gcaactatatcaggtatccttaatatagatgaagcgaaacgagaattagagatccttgat
gacgaagcagataatagaaaattaataaaagtaggagatattgttctcggggtaatccta
tttatccgacaatattctgttggcctacatttttatgctgtaaataataaaattcatttc
aattcaaattattttgggaatatacacgtatcagaaatttctgatagatatgttgaaaaa
attcaagatgcctttcaaaaaactgatattatacgagctcgtgtgattaaactccaatat
aatgaatttgatctaagtacatcaggtaaaaatcttggtgttgttcatgctgattgtgtg
gtttgtggaactactctaaagaaaattaattttaataagttacaatgcccacgttgcggg
agcacggaaactagaaaactcactgaagattatggaaacataaccgagaatctaagattt
taa

DBGET integrated database retrieval system