Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_48300
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Entry
Lokiarch_48300 CDS
T04015
Name
(GenBank) coproporphyrinogen III oxidase
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loki03016
]
Lokiarch_48300
Enzymes [BR:
loki01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
Lokiarch_48300
Transfer RNA biogenesis [BR:
loki03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Lokiarch_48300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
ELP3_N
DUF5020
Motif
Other DBs
NCBI-ProteinID:
KKK40803
LinkDB
All DBs
AA seq
546 aa
AA seq
DB search
MGNSTNNKNIRKISREVIKYLIKNPQTQRYKITNIKGRIGKKYKHFKVIKNATILSFATE
EEKKIVTRILKRRSTRTLSGVSVIAIMTKPLPCPGTCIYCPGQDSQPGEKVAQSYTGQEP
AAMRSIHNNYDPCSQVLNRIKDLEAIGHTIDKIELIIMGGTFLSTDVKYQEDFVKGALEG
IIEKRVKNLEEAKREAEKSRKRVIGITIETRPDYCKEIDVDRMLKYGTTRVELGIQTLNN
EIYELVKRGHSTKDSIEAIRIAKDAGLKVNVHMMPNLPGASLETDLEMFNSLFSNSDYRP
DMLKIYPTLVIKGTGLYNWWKQGKFIPFSDGELIDLIASVKQNIPSYVRIQRIMRDIPAN
LIEAGCKKSNLRQIIQKRLIEMNETCKCIRCREYGTKIVRGFDKRKDTINDTFLNEIKLY
RQDYKASEGQEIFLSYENQKENFLVGYLRLRKPSEFAHRSELNDGKTLIVREIKVVGELV
PRDSKPSQFSQIQHRGFGKVLIENAEKISREEFGAKKLAVISGIGVRGWFYDKAYKLDGV
YVSKFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactcaacaaataataaaaacataagaaaaatctcaagagaagtaataaaatat
ttaataaaaaacccacaaactcaacgctataaaatcacaaacataaaggggcgaatcgga
aaaaagtataagcattttaaagttattaagaatgctacaatccttagttttgccaccgaa
gaagagaaaaagattgttactcgaattcttaagagaagatcaaccagaaccttatctggt
gtttctgtaattgctattatgactaagccacttccatgtccgggtacttgtatttattgt
ccaggacaagattcccaaccaggagaaaaagtagcacaatcctataccggtcaagaaccc
gcggctatgaggtctatccataataattatgatccatgctcccaagttcttaaccgaatt
aaagacttagaagcaataggtcatactattgataaaatagaactcataattatgggaggg
actttcctgtcaacagatgtgaaataccaagaagattttgttaaaggggcattggaagga
atcattgaaaagagagtaaaaaatttggaagaagctaagagagaagctgaaaaatctagg
aagcgagtcattgggattacgatagaaacgagacctgattattgtaaagagattgatgta
gatagaatgcttaaatacggaactactcgagttgagttaggcatacagactttgaataat
gaaatctatgagttagtgaagaggggtcactcaactaaagacagtattgaagcaattcga
atcgcaaaagatgcgggtcttaaagttaatgttcatatgatgcctaatttaccaggtgcg
agtctcgaaactgacttagaaatgtttaactcattattttcaaactcagattatcgccca
gatatgttaaagatctacccaactttggttattaaaggaacgggattatataattggtgg
aaacaagggaaattcatacccttttctgatggtgagttgattgatttaatagcgagtgtt
aaacaaaatataccatcttatgtcagaatccagagaattatgagagatattcccgcaaat
ttaatagaagcgggatgcaagaaaagtaatttaagacagattattcaaaaaagattaata
gaaatgaatgaaacatgtaagtgcattagatgtcgagagtatggaacaaaaattgttaga
ggattcgacaaaagaaaagatacaattaatgatacatttctaaacgaaataaagctatat
cgacaagattataaagcatcagagggacaagagatttttttgtcttatgaaaatcaaaaa
gaaaattttttggtagggtatcttcgcttaagaaaaccatctgaatttgctcataggtca
gaattaaatgatgggaagacactaattgtgagggaaattaaagtcgtaggggaactagta
ccgagagattcgaaaccaagtcagttttctcaaatccaacatcgaggatttggaaaagtg
ctaatagaaaatgctgaaaaaatttctcgtgaagaatttggtgcaaaaaaattagctgta
attagtggcattggagtacggggctggttttatgacaaagcatataaattggacggagtt
tatgtttcaaaatttctttaa
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