Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_52810
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Entry
Lokiarch_52810 CDS
T04015
Symbol
polC_4
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03030
DNA replication
loki03430
Mismatch repair
loki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lokiarch_52810 (polC_4)
03430 Mismatch repair
Lokiarch_52810 (polC_4)
03440 Homologous recombination
Lokiarch_52810 (polC_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loki03032
]
Lokiarch_52810 (polC_4)
03400 DNA repair and recombination proteins [BR:
loki03400
]
Lokiarch_52810 (polC_4)
Enzymes [BR:
loki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lokiarch_52810 (polC_4)
DNA replication proteins [BR:
loki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lokiarch_52810 (polC_4)
DNA repair and recombination proteins [BR:
loki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lokiarch_52810 (polC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
KKK40281
UniProt:
A0A0F8XVQ3
LinkDB
All DBs
AA seq
190 aa
AA seq
DB search
MFDSRVCVVDVETSGLNPNYDLIFEIGMVELNLSTGVTKILFDSVVKESLFGKEYRGSWI
FENSSLTFDDVNNAPLFDGFIPELQEIFNNYSITAFNKSFDLGFLNSRGLRVPNELPCIM
LTATNILKIPFPNGRKRFKWPNCQEAWDYFFPNSPYVEKHRALDDALHEAMIFFEIFRRG
LIPIIEEIVN
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagtcgagtttgtgttgtagatgtcgaaaccagtggattaaacccgaattat
gatttaatttttgaaattgggatggttgaattaaacttaagtacaggtgtaactaaaata
ttattcgattctgtagtgaaggaatccttatttgggaaagaatatagaggttcatggatt
tttgagaattcttctcttacttttgatgatgtaaacaacgcccccctatttgatggtttt
attccagaattacaagaaatatttaacaattatagtataacggcgtttaataaatcattt
gatctaggatttctaaattcacgagggttaagggtaccaaacgaacttccatgcattatg
ttaactgctacaaatattcttaaaataccattcccaaatggtagaaaacgtttcaaatgg
cccaattgtcaggaagcatgggattacttctttccaaatagtccttatgttgaaaaacat
cgtgctcttgatgatgctctccatgaggcaatgattttttttgaaatattccgacgtggt
ttgattccaattatcgaagagatcgttaactaa
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