Paucilactobacillus oligofermentans: LACOL_0006
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Entry
LACOL_0006 CDS
T06755
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lol
Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0006 (gyrA)
Enzymes [BR:
lol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LACOL_0006 (gyrA)
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Topoisomerases
LACOL_0006 (gyrA)
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LACOL_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CUS25314
UniProt:
A0A0R1RF55
LinkDB
All DBs
Position
I:6235..8772
Genome browser
AA seq
845 aa
AA seq
DB search
MAEKDISGTKITDVNLSSQMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGV
TPDKPYKKSARIVGDVMGKYHPHGDSAIYESMVRMAQDFSYRNMLVDGHGNFGSVDGDGA
AAMRYTEARMSKIAMEMVRDINKDTVDFVDNYDGTEREPSILPARFPNLLVNGASGIAVG
MATNIPTHNLAEVIGAIHILMDNPEATTADLMEAVPGPDFPTGGIVMGKSGIRKAYETGR
GSIIVRAKVDIEELKNGKQRIVVTELPYMVNKAKLIERIAELARDKRIEGITDANDESDR
EGMRIAIDVRRDVSAEVVLNNLYKLTLLQTSFSFNMLAIVKGTPKVLSLKQILEYYLEHQ
EQVVRRRTEFDLKKAQARAHILEGLRIALDHIDAIIAIIRGSQTSEIAKNQLIENYSLSE
RQAQAILDMRLVRLTGLERNKIEDEYNALMDSITDFKDILEHSERIQKVIYQELLEIQEK
FGDPRRTELQVGDVTSIEDEDLIEEEDVIVSLTHNGYIKRLPVDEFKTQNRGGRGVQGMG
VHDDDFIEQMISTSTHDMLLFFTNTGKVFSMKGYEIPEYGRTAKGIPIINLLGIDSEEKI
SAVVNIARETNNDDNFLFFTTLKGTVKRTPVSEFTHIRNNGLKSITLKEDDSLIGVSIIS
EDQNMIIGTHLGYAVSFKGADVRSMGRSASGVRGIRLRENDYVIGVDILEADSKVFIISE
KGFGKQTSASEYPIKGRGGKGIKTANVTEKNGPLAGMTTVTGDEDIMLVTDKGVIIRFDV
ANVSQTGRATLGVHLIKMDDETHVATMTKVAKEVDVPEDEAEATTDSIETAVEAPANTDE
SSTEE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaaaagatatttcaggaacaaagataaccgatgtgaatctatcgtcacagatg
cgaacatcatttttagattacgcgatgagtgttattgtggcgcgtgcgttaccagatgtt
cgtgatggcttaaaacccgtccatcgtcggattttgtatggaatgaacgaattaggtgtt
acaccagataaaccttataaaaaatcggcgcgtatcgtcggtgacgttatgggtaagtat
catcctcatggggattcagcaatttatgaatcaatggtccggatggcacaagattttagt
tatcggaacatgcttgttgatggtcatggtaactttggttccgtcgatggtgatggcgct
gctgccatgcgttataccgaagcgcgaatgagtaaaatcgcgatggaaatggttcgtgat
attaataaagatactgttgattttgttgataattatgatggtactgaacgagaaccatca
attttgccagctcgttttcctaacttattagttaatggagcttctggaattgcggttggg
atggcaactaatattccaacccataatttggctgaagtaattggcgcaatccatatttta
atggataatcctgaggcaactacggctgacttgatggaagccgttccgggtcctgatttc
ccaactggtggaattgtgatgggtaagtcagggattcgtaaggcttatgaaactgggcgc
ggaagcattattgtccgggctaaagtcgatatcgaagaactaaaaaatggtaagcaacga
attgttgtgactgaattaccttacatggttaataaagctaaattgattgaacgaattgct
gaattagctcgtgacaagcggattgaaggaattacggatgccaacgatgaatctgatcgt
gaaggtatgcggattgccattgatgttcgtcgcgatgttagtgccgaagtcgttttaaat
aatttatataaattaacgttattgcaaacatcatttagttttaacatgttggccatcgtt
aaaggaacgccaaaagttcttagtttaaaacaaattcttgaatattatcttgaacatcaa
gaacaagttgttcgtcgtcggactgaatttgacttgaaaaaggcacaagcgcgagcacat
attctcgaaggattgcgaatcgccttagatcatattgatgcaattattgcgattattcgt
ggttcacaaacgagtgaaattgctaaaaatcaattaattgaaaattattcattatctgaa
cgtcaagcccaagcaattcttgatatgcgtttagttcgtttgactggtttggaacgtaat
aaaattgaagatgaatacaatgcgttaatggattcaattactgattttaaagatattttg
gaacattctgaacgaatccaaaaagttatttatcaagaacttcttgaaattcaagaaaaa
tttggcgatcctcgtcgaactgaattacaagttggagatgttaccagtattgaagatgaa
gacttgattgaagaagaagacgtaatcgtttcgttgactcataatggttacattaaacga
cttccagttgatgagtttaaaactcaaaatcgtggtggtcgtggcgttcaaggcatgggt
gtccatgatgatgatttcattgaacaaatgatttcaacgtcaacacatgatatgctgctc
ttctttaccaatactggtaaggtgttctcaatgaagggttatgaaattcctgaatacggc
cgaacagctaagggaattccaatcattaatttactcggaattgattcggaagaaaaaatt
tcagccgttgttaacatcgctcgtgaaactaacaatgacgataacttcttattcttcaca
accttaaagggaacggttaaacggacgccggtttctgaatttacccatattcggaataat
ggtttgaagtcaattacccttaaagaagatgattcgttaattggcgtttcaattatctct
gaagaccaaaacatgattatcggaactcatttaggctacgcagttagctttaagggtgct
gatgttcgttcaatgggacgttccgcttctggagttcgtggaattcgtttacgtgaaaat
gattatgtaattggtgttgatattcttgaagctgatagtaaagtctttattattagtgaa
aaaggatttggtaagcaaacgagtgccagtgaatatccaattaaaggtcgtggtggtaaa
gggattaagaccgctaacgtgactgaaaagaacggaccattagctgggatgacgacagtt
actggtgatgaagatatcatgttggtaactgataaaggggttatcatccgctttgatgtt
gcgaatgtatctcaaacgggacgagcaacattgggagttcatttaattaaaatggacgat
gaaactcatgtggcaacgatgacgaaagttgctaaagaagttgatgttcctgaagatgag
gctgaagcaacaactgacagtattgaaactgccgttgaagcaccagctaacacagatgaa
tcatcaaccgaagaataa
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