Paucilactobacillus oligofermentans: LACOL_0511
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Entry
LACOL_0511 CDS
T06755
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LACOL_0511 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lol03021
]
LACOL_0511 (rpoA)
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0511 (rpoA)
Enzymes [BR:
lol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LACOL_0511 (rpoA)
Transcription machinery [BR:
lol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LACOL_0511 (rpoA)
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LACOL_0511 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CUS25819
UniProt:
A0A0R1RPK8
LinkDB
All DBs
Position
I:538546..539490
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHIIEENDGYGKFVIEPLERGYGTTLGNSLRRILLASLPGSSITSIQIDGVL
HEFSSVEGVTEDVTQIILNIKKIALKIDSEDDKTLEIDVKGPAVVTAGDIQADGDVTILN
PDLQLATVADGVELHMQMTANTGRGYVSADDNKSRMEDLPIGVLPIDSIYTPIERVNYNV
EDARVGQRNDYDKLTLDVWSDGSITPSEAISLAAKILTEHLAMFVDLTETAKNAEFMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINSVQELTDRSEADMMKVRNLGRKSLEEVK
VKLTDLGLSLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgaaaaaccaaacattcatattattgaagaaaatgatggctatggtaag
tttgttatcgaaccattggaacgcggatacggtacaactttaggaaactcgcttcgtcga
atcctacttgcatcacttcccggttcatctatcacaagtattcaaatcgatggtgtttta
catgaattttcaagtgttgaaggtgtgactgaagatgttactcaaatcattttgaacatc
aagaaaattgcattgaagatagattcagaagatgacaagaccttggaaatcgatgttaaa
ggcccagcagttgttactgcaggtgacatccaagccgatggcgatgttacgattttgaac
cctgatttacagttagctactgtcgctgatggtgttgaattgcatatgcaaatgactgct
aatactggtcgtggctatgtttcagcagacgataacaagtctcgaatggaagatctacca
atcggtgtattgcctattgattccatttataccccaatcgaacgagtaaactacaacgtt
gaagatgctcgtgttggtcagcgtaatgattacgacaagttgacacttgatgtatggtct
gatggatcaattacaccaagcgaagctattagtttggccgctaagattttgacagaacat
ttagctatgtttgttgatctaactgaaactgccaagaatgctgaattcatggtagaaaaa
gaagagacacataaagaaaagatgttagaaatgactatcgaagaacttgatttatcagtt
cgttcttataactgtctcaagcgtgctggaattaattctgtccaagaattaactgaccgt
tctgaagctgatatgatgaaggttcgtaatttaggacgcaagtcgttagaagaagttaag
gttaaattaactgatttgggattatcacttcgtaaagaagattaa
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