Paucilactobacillus oligofermentans: LACOL_0529
Help
Entry
LACOL_0529 CDS
T06755
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03420
Nucleotide excision repair
lol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LACOL_0529 (pcrA)
03430 Mismatch repair
LACOL_0529 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0529 (pcrA)
Enzymes [BR:
lol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACOL_0529 (pcrA)
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACOL_0529 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LACOL_0529 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Rep_Org_C
FWWh
Motif
Other DBs
NCBI-ProteinID:
CUS25837
UniProt:
A0A0R1REF7
LinkDB
All DBs
Position
I:555534..557780
Genome browser
AA seq
748 aa
AA seq
DB search
MANLPLIKGMNDRQSEAVLATEGPLLVMAGAGSGKTRVLTHRIAYLIEEKDVNPWNILAI
TFTNKAAKEMRDRVGKLLPEGARDVWVSTFHALCVRILRRDIEQIGYNRAFTIAATSEQK
TLIKRVCADLNIDTKKFDPRAITSEISNAKNALKTPAEYEAEAASPFENIVANVYKNYQR
ELRANQAVDFDDLIMLTIELFEKNAETLSFYQNKFHYIHVDEYQDTNDAQYKLVNMLAKN
FRNLCVVGDADQSIYGWRGANMENILNFEKDYPDAKTVLLNQNYRSTQTILDAANGVIKN
NTIRREKDLWTDNGDGEKISYYRGQSENDESHFVVSKIQEGIKDDHKNYNDFAILYRTNA
QSRVIEETFLKANVPYTMVGGHKFYDRKEIRDVLSYLTLLVNPADSMSFERVVNEPKRGL
GASSIDKLRAFAGENNWSMLEASQNVLLNNGLSTRARNSLDEFGRMMAELQKMTEFLSIT
EITQQILEKTGYTAALAANPTLENQSRIENLDEFMSVTQDYDKNHPDDEVENKAENLINF
LADLQLVSAQDDVDETAPSVTLMTLHAAKGLEFPVVFLMGLEEGIFPLSRAIMEDDELEE
ERRLAYVGITRAKEKLYLTNAYSRMLYGRHQNNQASRFIDEIDAELIKNENVNVGGGASG
ARQVPFAQRNATATTYRAATTSTKVVSFDGTGADKVAWKTGDKVNHKKWGQGTVVKINGA
GDDMELDIAFPAQGIKRLLASFAPIEKA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatttaccattgataaaaggaatgaacgaccgtcagtcagaagcggttttagca
actgaaggaccactacttgtaatggcgggtgctggatcaggtaaaacacgggtcttaaca
catcgaattgcttatctaattgaagaaaaagatgttaatccatggaatattttagcgatt
acgtttactaataaggccgctaaagaaatgcgcgatcgagttggtaagttattacctgaa
ggtgcacgtgatgtgtgggtatcaactttccatgctctttgtgtccgtattttacgacgg
gatattgaacaaattggttacaaccgagcctttacgattgctgccacaagcgaacaaaaa
acgctgattaaacgggtttgtgctgacttaaatattgacacaaagaagttcgatccacgt
gcgattacatccgaaatttctaatgctaagaatgctttaaaaacaccggcagaatacgaa
gctgaagccgcatcaccatttgaaaatattgtggcgaatgtttataaaaattatcaacgt
gaattgcgggctaatcaagccgtagattttgatgatttaatcatgttaacgattgaatta
tttgaaaaaaatgcagaaactttatcgttttaccaaaataaatttcattatatccatgtt
gatgaatatcaagatacgaatgatgctcaatataaattggtcaacatgctagctaaaaat
ttcagaaacttgtgtgtggttggggatgcagaccaaagtatttatggttggcgtggcgca
aacatggaaaatattttgaactttgaaaaagattatcctgatgcaaaaacagttttgtta
aatcaaaactatcgttcaacgcaaacaattttagatgctgctaatggggtcattaaaaat
aatacgattcgtcgagaaaaagatttgtggactgataacggtgatggagaaaagatatct
tattatcgtggccaatcagaaaatgacgaatctcattttgtggtgtctaaaattcaagaa
ggtatcaaagacgaccataaaaattataatgattttgccatactatatcggaccaatgcc
caatcacgtgttattgaagaaacttttttgaaggccaacgtgccatatacgatggttggt
ggacacaagttttatgaccgtaaagaaattcgtgatgtgctttcatacttaacgttatta
gttaatccagctgattcaatgagctttgaacgagtagttaatgaacccaaacgcggactg
ggagcaagcagtattgataaactccgcgcttttgcgggtgaaaataactggtcaatgttg
gaagcttcacaaaatgtgttgttaaataatggtctttcaacccgtgcccggaattcactt
gatgaatttggtcggatgatggctgaattacaaaaaatgaccgaatttctgtcaattact
gaaataacgcaacaaattttggagaaaacgggttatacagcggccttagcagctaatcct
acgcttgaaaatcaatcaagaattgaaaacttggatgaattcatgtcagttactcaagat
tatgataagaatcatccagacgatgaagttgaaaataaggcagaaaatttaatcaacttc
ttagctgatttacaattagtttcagctcaagacgatgttgatgaaactgcgccgtcagtg
acattaatgactttacatgcagctaaaggacttgaatttccagtagtcttcttaatggga
cttgaagaaggaatttttccactttcacgggccattatggaagatgacgaattggaagaa
gaacgtcgcttagcttatgttggaattacgcgtgcgaaggaaaagttatacctaacgaat
gcttattcacggatgttatatggacgtcatcaaaataaccaagcgtcacgatttattgat
gaaattgatgcggagttaattaagaatgagaacgtcaatgtcggcggtggagcttctgga
gcacggcaagtaccatttgcacaacgaaacgcgactgcaactacttatcgtgctgcgaca
acttcaactaaggtggtttcatttgatggaactggggctgacaaagttgcttggaaaacg
ggcgataaagttaaccataaaaaatggggccaaggtaccgttgttaaaatcaatggtgca
ggtgacgatatggaacttgatattgcctttccagcccaaggtattaaacgcttgttagct
agttttgctccgattgaaaaagcttaa
DBGET
integrated database retrieval system
