Paucilactobacillus oligofermentans: LACOL_0689
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Entry
LACOL_0689 CDS
T06755
Symbol
sbcD
Name
(GenBank) Possible exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lol
Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0689 (sbcD)
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LACOL_0689 (sbcD)
Archaeal homologous recombinant proteins
LACOL_0689 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
CUS25997
UniProt:
A0A0R1RPV8
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All DBs
Position
I:719324..720490
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AA seq
388 aa
AA seq
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MKLLHTADWHIGKELGEYSLLEEQWHAFHQIVKIAVDEKVDGIIIAGDLYDRAIAPTSAV
NALESMLRELNLDKNFPIYAVSGNHDGATRLGAGHEWREQTKLFLNTSLAGAFTPIETDE
AQIFLLPFLDPLEARTYYQIPEEQAANYSTIEQVMAKIVPDLVAQFIDNKQHLLVTHFNV
TGSGNDDYQFTSETNSRVGGLKGVPAALFNDFDYVALGHIHLKQASPNPKMQYAGSPVKF
NTKEAQSEKGCFIVNINEDGVTTDWKPIVTGKDLIVLKGSYDELIQPEFYEQYERNGKNW
FSITIDGIGAREARATLSNIYGDVVEINYNLPKLTDNTKTKFAIQAKGQAEEDVVGEFYR
EVTDDELSTKQVKIVEQTLTELRKAEEN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactgcataccgcagattggcatattgggaaagaactaggtgaatattcacta
ctagaagaacagtggcatgcctttcatcaaattgtaaagattgctgttgatgaaaaagtc
gacggtattattattgctggtgacttatatgaccgggcaattgcaccaacttccgcagtg
aatgcattggaatcaatgttacgagaactaaatttagataaaaactttccaatttatgca
gtttctggtaatcatgacggtgctacaagattaggtgccggacatgaatggcgagagcag
actaaattatttttaaataccagtttagctggtgctttcacaccaatcgaaactgatgaa
gcacaaatttttttattaccatttttagatccgttggaagccagaacgtattatcaaatt
ccagaagaacaagctgctaattattcaactattgaacaagttatggctaaaatagttcct
gatttagttgctcaatttatagataataagcagcatcttttagtgactcattttaacgtt
acaggatcaggcaatgatgactatcaatttacatctgagaccaattcacgcgttggtgga
ttaaaaggggttccagcagctttatttaatgattttgactatgttgccttgggacatatt
catttaaagcaagctagtcctaatcccaaaatgcagtatgcgggttcaccagttaaattt
aataccaaagaagcgcagtctgaaaaagggtgtttcattgttaatatcaacgaagatggt
gtgacaacggattggaaaccaatcgtcacggggaaagatttaattgttctgaaaggaagc
tatgacgaattaattcaacctgaattttatgagcaatatgaacgaaatggtaagaactgg
ttcagtatcacaatcgatgggattggtgctcgtgaagccagagcaacattgagtaatatt
tatggggatgtcgttgaaattaattacaacttacccaaattaaccgataacaccaagact
aagtttgcgattcaagccaaaggacaagccgaagaagatgtcgtcggcgaattttatcgt
gaagtgactgatgatgagctatcaaccaaacaagttaaaattgttgagcaaaccttaact
gaattaagaaaagcggaggaaaactag
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