Paucilactobacillus oligofermentans: LACOL_0740
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Entry
LACOL_0740 CDS
T06755
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03030
DNA replication
lol03410
Base excision repair
lol03420
Nucleotide excision repair
lol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACOL_0740
03410 Base excision repair
LACOL_0740
03420 Nucleotide excision repair
LACOL_0740
03440 Homologous recombination
LACOL_0740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_0740
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0740
Enzymes [BR:
lol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACOL_0740
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LACOL_0740
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LACOL_0740
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACOL_0740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
CUS26048
UniProt:
A0A0R1RPC5
LinkDB
All DBs
Position
I:772012..774672
Genome browser
AA seq
886 aa
AA seq
DB search
MAKKVLLIDGNSVAFRAFFALFQQVDKFVNQDGLHTGAIFGFNKMLDIILDEVKPDYAIV
AFDAGKTTFRTEMFPDYKGGRSKTPSELSEQMPFIKKLVQAHGIKTYELPNYEADDIIGT
LAKEADNSGYMTTVVTGDRDLTQLSTDNVTVSVTKKGVTEVENYDPVHVMEKYEITPAQI
IDMKGLMGDASDNYPGVTKVGEKTAIKLLKQYGTIEGIYEHIDEFKQSKMKEHLIEDQEL
AFQAKKLATINQDAPIEIKLSDIEFKGIQTEELIELYRQLDFKSYLAKLDGEQISLDLDA
ALSEIEFTVLNQDNLNEVNQFNDEITLYVEMPDSNYHTSEFTGFVMGNNSHWLVSRDIDL
LQSDEIKSVLESNDIKKNVFNAKAMTVALNRLGIKLNNLDFDLLLASYLLDTNDNSDDLG
QVAHEHGFMDVMSDESVYGKGAKFAIPADQELFEHLAHKANAIDVLHEKLVKELETNEQT
ALYRTIELPLSNVLSKMEIRGIHVNADTLESMGSKLIERMSEMKQLIYQEAGEEFNINSP
KQLGEILFEKMGLPVIKKTKTGYSTAVDVLEKLRADAPIVDNVLQYRQISKLQSTYIEGL
LKVIHSTDQKVHTRYLQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQAFEPSHEGWEIFS
SDYSQIELRVLAHITGDKNLQEAFIEDEDIHASTARRIFKLGPNDEINRDQRRQAKAVNF
GIVYGISDFGLAQNIGITRKQAKMFIETYFEEFPGVKQYIDDIVGLAHQQGYVETLTNRR
RYLPDIHAKNFNLRSFAERTAMNTPIQGSAADIIKIAMIKMEDALKDAGLQAKMLLQIHD
ELVFEAPAEEIPTLEKLVPRIMDSAVSLDVPLKVESAHGKTWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagtattattaattgatggaaacagtgttgcatttagagcgttttttgcg
ttatttcaacaagtagataaatttgtgaatcaggatggtcttcatactggggctattttt
ggcttcaataaaatgctagatatcattttagatgaagttaaaccagattatgcaattgtg
gcttttgacgctgggaaaaccacttttaggactgaaatgtttccagattataagggtggc
cgttcaaaaaccccatcagaattatcggaacaaatgccatttattaaaaagttagttcaa
gctcatggaattaaaacctatgaattacccaattatgaagcggatgacatcattggtacg
ctagctaaagaagctgataatagtggttatatgactaccgttgtaactggtgatcgtgat
ttaacccagttatcgactgacaatgtgaccgtttcagtgactaaaaaaggggttacggaa
gtagaaaattatgatcccgtacacgttatggaaaaatatgaaattacgccagctcaaatt
attgatatgaaagggctaatgggtgatgcttcagataattatcctggagtaactaaagtc
ggcgaaaagacggcgattaagttattaaagcaatacggcactatcgaaggtatttatgaa
catatcgatgagtttaagcaaagtaaaatgaaagaacatttgattgaagatcaagaacta
gcatttcaggctaagaaactagcaaccatcaatcaagatgcaccaatagaaattaagtta
tctgatattgaatttaaaggaattcaaactgaagaattaattgagttgtatcggcaatta
gattttaaatcatatttagctaaattagatggtgaacaaattagtttagatttagatgct
gcccttagtgaaattgaatttactgttttgaatcaagataatttaaatgaagtgaatcag
tttaatgatgaaattacgttatatgttgagatgccagacagtaactaccatacgtccgaa
tttactggctttgttatgggtaacaatagccactggttagttagtcgtgatattgactta
ctccaatccgatgaaattaagtcagtccttgagagtaatgatattaaaaagaatgttttt
aatgcaaaagcgatgacagtggcattgaatcgattagggattaagttaaataacttagat
tttgatttattactagcttcatatctattagataccaatgataacagtgatgatttaggc
caagttgctcatgaacatggctttatggatgtaatgtctgatgaatcagtttatggtaaa
ggtgctaaatttgcgattcctgcagatcaagagttatttgaacatcttgcacacaaagct
aatgcaattgatgtcttacatgaaaagctcgttaaggaattagaaacaaatgagcaaact
gctttgtatcgtacgattgagttgccattatcgaatgtattgtcgaaaatggaaattcgt
ggaattcatgtgaatgccgatacgcttgagtcaatgggtagcaagttaattgagcgtatg
agcgaaatgaaacaattgatttatcaagaagctggtgaagaatttaatatcaattcaccc
aaacaactaggtgagattctatttgaaaaaatgggcttaccagtaattaaaaaaaccaag
acgggttattcaactgctgtcgatgtgctagaaaaattacgtgctgatgcaccaatcgtt
gataatgtcctccaataccgtcaaatttctaaattacagtcgacttatattgagggctta
ctgaaagttattcattcgactgatcaaaaggtgcatacacgttatcttcaaaccttaacc
cagactggtcgactatcatcagttgatcctaatctacaaaatattccaattagattagaa
gaagggcgtaagattcgacaagcatttgaacccagtcatgaaggttgggaaatattctca
tctgattattcacaaattgaattacgcgttttagcacatattacgggcgataagaatctg
caagaagcttttatagaagatgaggatatccatgctagtacagcgcgccgaatttttaaa
ttaggacctaatgatgaaattaatcgtgaccaacgtcgacaagccaaagccgttaatttt
ggaattgtctatggaattagtgactttggtttagcacagaatattggaattactcgtaaa
caagccaaaatgtttattgaaacctattttgaagagttcccaggagttaaacagtatatt
gatgatattgtaggtttggcgcatcaacaagggtacgttgaaaccttaactaatcgtcgc
cgttatttacctgatattcatgcaaagaactttaatttacgttcatttgccgaaagaact
gcaatgaacacaccaattcaaggtagtgctgccgatatcatcaaaattgcgatgattaaa
atggaagatgctttaaaagatgcgggactgcaagccaaaatgttgttacaaattcatgat
gaattagtattcgaagctcccgcagaagaaattcctacgctagaaaaacttgtaccaaga
attatggattcagccgtatcattagatgtaccattaaaagttgaaagtgcgcatggtaaa
acatggtacgaagcaaaataa
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