Paucilactobacillus oligofermentans: LACOL_0794
Help
Entry
LACOL_0794 CDS
T06755
Name
(GenBank) Putative phage DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03030
DNA replication
lol03430
Mismatch repair
lol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACOL_0794
03430 Mismatch repair
LACOL_0794
03440 Homologous recombination
LACOL_0794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_0794
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0794
Enzymes [BR:
lol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACOL_0794
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACOL_0794
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACOL_0794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
TM2
BRCT_2
DEDDh_C
DNA_pol_A_exo1
PTCB-BRCT
RNase_H_2
CEL_III_C
Motif
Other DBs
NCBI-ProteinID:
CUS26102
LinkDB
All DBs
Position
I:complement(819816..821216)
Genome browser
AA seq
466 aa
AA seq
DB search
MENNELLEQLTTQERLLVSSEVSNKRKSPAVVWILWLLLGMIGAHRYYFKKIGTGVLMTA
IFILSFGMLFFVNLIWMIVDAFKLNREINADQAKIEKEVAEHIINTRNEFKSSPEVAKEP
IKSVDTTQEEIGINASESPVADNVITEENEPTSSSSTLKQDIVTSFSFSNTTASVETPNF
TVTPEESETVVNKIFDDLKDFVVLDIETTGRSADQDGITQVSGIKYVNDEPIETFNEFVN
PEHDIPRDIQFMTHITPEMVADKPTFTELLPKLSDFIGDNTIIGHNVSFDIKFLRLHGYH
PAVITTEDTLSISRRKIKNIENHKLETLKNYYGLKNQSHNSLNDCETTAFIYREIRDGHL
DQVVIASTEETPGTLFADLRFCITGKFMEMDRDEIKELITKNGGRVTGAVSSRTDYLIVG
EQVANNLTDGIHSASELKAMEFSEKGGKIKVLHSIEELQSLISEVA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaatgaacttttagaacaactcacaacacaagaacgtttattggtaagttca
gaagttagcaacaagcgaaaaagtccagcagtagtttggatattatggttacttcttgga
atgattggtgctcatcgttattatttcaaaaaaattggtactggcgtactaatgaccgca
atttttattttgtcattcggcatgttatttttcgttaatttaatttggatgattgttgac
gcttttaaacttaatagggagattaatgcggatcaagcaaaaattgaaaaagaagttgcc
gagcacattatcaatactcgtaatgaatttaaaagctctccagaagttgctaaagaaccc
attaaaagtgttgatacaacacaggaagaaattggtataaatgcctctgaatcgcctgtt
gctgataatgtaattacagaagaaaatgaaccaactagttcttcatctacattaaagcaa
gatatagtgacatcattcagtttttcaaacactactgctagtgttgaaactccaaatttc
acagtaacaccagaagaatctgaaacagtcgttaacaaaatttttgacgatttaaaagat
tttgttgttttggatattgaaacaactggacgtagcgcagaccaagacggtattacacaa
gtttctggtatcaaatatgttaatgacgaaccaatcgaaacgttcaatgaatttgttaat
ccagaacatgacatcccccgcgacattcaatttatgacacacataacacctgaaatggtt
gcagacaaaccaacatttacagaactgttaccaaaactttctgacttcattggcgataat
acaattattggtcacaatgtgagtttcgacatcaaattccttcgattacacggatatcat
ccagctgtaattacgactgaagataccttaagtatttcacgtagaaaaattaaaaatatc
gaaaatcataaacttgaaactttaaaaaattattatggcctaaaaaatcaatctcacaat
tctttgaatgactgcgaaactactgctttcatatatcgtgaaatacgcgatggacactta
gatcaagttgttattgcttctacggaagaaaccccaggtactttatttgctgatctaaga
ttctgtattaccggtaaattcatggaaatggatcgtgacgagattaaagaattaatcact
aagaatggcggtcgtgtcactggtgcagtttcaagtcggactgattatctaattgttggc
gaacaagttgctaataatttaaccgatggaattcatagtgcatctgaattgaaagcaatg
gaattttctgaaaaaggtggaaaaattaaagttctgcacagcattgaagaattacaatca
ttaatttctgaagttgcctaa
DBGET
integrated database retrieval system
