Paucilactobacillus oligofermentans: LACOL_0865
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Entry
LACOL_0865 CDS
T06755
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LACOL_0865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0865
Enzymes [BR:
lol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACOL_0865
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LACOL_0865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
AAA_19
Zn_ribbon_6
AAA_30
DUF1344
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
CUS26173
UniProt:
A0A0R1RCW9
LinkDB
All DBs
Position
I:871113..873533
Genome browser
AA seq
806 aa
AA seq
DB search
MAEIAQVIVDVPTMQTNRPYTYQVPAQFDRQIQVGMRVIIPFGNGSRQVQGFVVGLDEQT
EFDGELKSIISIMDLNPVLNQELLAMSQWLADSCYAFRISCMHTMLPNVMKTKTQRYLQI
IDELSETDLFELFHGQDEILFDPENMPAETVSRLLKLKRQHQIEVTYALTDQAKAKFVTS
IKPTMSFERYEEERSLLRASAKAQNKLLSFLQSILGKEMSLSEAKEITGLANSIFTTGEK
KQWLEKDQLEVLRTPQTTLNSDNKVIPELTADQKVAVDAICESINQEKTAETFLLQGVTG
SGKTEVYLRAIEETLSEDKTALMLVPEISLTPQMVTRVKGRFGELVAVLHSGLSNGERYD
EWRRIERGEAKVVVGARSAIFAPLQSIGLIIMDEEHETSYKQDETPRYHARNVAKWRSEY
YGATIVLGSATPSLESRARAQKGVYHHLLLPERINQQPLPAVQVIDMRQELRKHAESNFS
TALLDAVKDRISRGEQSILMLNRRGYSSFIMCRDCGFVMQCPNCDISLTLHMDTHTMKCH
YCGHEEGIPKICPNCQGHKIRYYGTGTQKVQEELQSLIPDAKILRMDVDTTRRKGAHEKL
LNAFGNQEADILLGTQMIAKGLDFPNVTLVGVINADTALGLPDFRSSERTFQLLTQVSGR
AGRADKAGAVIVQTFNPDHYAIKLAQHHDYERFFQTEMNIRHRGKYPPYFYTLQISVSHE
EEVQAAKSIMEIAQFLKANLAATSIILGPTPKSIARMNRKYYYQLVIKYKQDNQLHSTLT
QMMDQIQKQSRQGIQISIDPEPQHFI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcgcacaagttatcgtggatgtcccaacaatgcaaaccaatcgtccttat
acttatcaagtacctgcgcagtttgaccgtcaaattcaagttggcatgcgggtaattatt
ccgtttggaaatggaagtcgacaggtacaaggatttgtcgttgggttggatgaacaaact
gagtttgatggtgaactcaaatcaattatttcaattatggatttaaatcctgttttgaat
caagaactgctagcgatgtctcaatggttagcagactcttgttatgccttcagaatctcc
tgtatgcacacaatgttacccaatgtgatgaaaactaaaacacaacgatatttacaaatt
atcgatgaattaagcgaaacagatttatttgaactatttcacggccaagatgaaatttta
tttgatcctgaaaatatgccggcagaaaccgtaagtcgcttattaaaattaaaacgtcag
caccaaattgaagttacatatgcgttgactgatcaagccaaagcaaagttcgttaccagt
attaagccaaccatgagctttgaacgttacgaagaagaaagatctttgttacgtgctagt
gcaaaagcgcaaaataaattgttgtcatttttacaaagtattcttggtaaagaaatgtca
ttgagtgaagcaaaagaaataactggattagctaattcaatttttacaactggtgaaaaa
aaacagtggcttgaaaaagaccaactagaagttttacggacgccgcaaaccactttaaat
agtgataataaagtaattcctgaactaaccgctgatcaaaaagtggcagttgatgcaatt
tgcgaatcaatcaatcaggaaaaaacggctgaaacctttctattacaaggggtaactggt
agtggaaaaaccgaggtttatttacgagccatcgaagaaacgctaagtgaagataaaacg
gctttaatgttagttcctgaaatttcattgacgccacaaatggtgacacgcgttaaaggc
agatttggtgaattagttgccgttttacatagtggtctttcaaatggtgaacgatacgat
gaatggcgccgaattgaacgtggtgaagcaaaagtggtggttggtgctcgctccgctatt
tttgcaccattgcaatcgattggtttgattattatggatgaagaacatgaaactagttat
aagcaagatgaaaccccacgttatcatgcacgtaacgttgctaaatggcgtagtgaatat
tatggggcaacaattgtgttaggtagtgcaaccccaagtttagaatcacgcgcacgtgcg
caaaaaggggtctatcatcacctgttgttgcccgaacgcattaatcagcagccgttaccc
gcagtccaagtaattgatatgcgacaagaattacgtaaacatgccgaaagtaatttttca
acggctttattagacgccgttaaagaccggattagtcgcggtgaacagagtattttaatg
ctaaatcgccgtggctactcgtcctttattatgtgccgggattgtggttttgtgatgcaa
tgtcctaattgtgatatttctttaactttacatatggatacacatacgatgaaatgtcat
tattgtggtcatgaagaaggcattccaaagatttgtcctaattgccaaggccacaaaatt
cgatactatggaaccggaacccaaaaagttcaagaagaactccagagtttaattccggac
gctaaaattttgcgaatggatgtggatacaaccagacgtaaaggtgcccatgaaaaatta
ttaaatgcgtttggtaatcaagaagcagatatcttattgggtacccaaatgattgcgaag
ggattagattttcctaacgtgaccttagtgggagttataaatgctgataccgcattaggc
ttacccgactttcgttcgagtgaacgaacctttcaactattaactcaagttagtggtcga
gccggccgtgctgataaagccggagcggtgattgtccaaacctttaatccggatcattat
gcgattaagttagctcaacatcatgattatgaacgcttttttcaaacagaaatgaacatt
cggcaccggggtaaatatccaccttacttctatactttacaaattagcgtgagccatgaa
gaagaagttcaagccgcaaagtcaattatggaaattgctcaatttttaaaggctaattta
gcagcaacgagtattattttaggaccaacgcccaagtcaattgcgcgaatgaatcgtaag
tactactatcaattagtaatcaaatataaacaagataatcaattgcattcaacattaact
caaatgatggatcaaattcaaaaacaaagtcggcagggcattcaaatctcgattgaccca
gagccacaacattttatataa
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