Paucilactobacillus oligofermentans: LACOL_0879
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Entry
LACOL_0879 CDS
T06755
Name
(GenBank) Ribonuclease III Rnc
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lol
Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lol03019
]
LACOL_0879
03009 Ribosome biogenesis [BR:
lol03009
]
LACOL_0879
03036 Chromosome and associated proteins [BR:
lol03036
]
LACOL_0879
Enzymes [BR:
lol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LACOL_0879
Messenger RNA biogenesis [BR:
lol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LACOL_0879
Ribosome biogenesis [BR:
lol03009
]
Eukaryotic type
90S particles
RNase
LACOL_0879
Prokaryotic type
rRNA processing factors
LACOL_0879
Chromosome and associated proteins [BR:
lol03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LACOL_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF2500
Motif
Other DBs
NCBI-ProteinID:
CUS26187
UniProt:
A0A0R1RKT8
LinkDB
All DBs
Position
I:886984..887679
Genome browser
AA seq
231 aa
AA seq
DB search
MIKIKALEEHLEKTFGIHFNDSSLLAEAFTQASYVNEHPKENLKYYERIEFLGDAVMQLT
VSEYIYQRYPEMPQGKLSRLRIAMVQEDSFSKFALECQFDQFIRLGKGEEKAGARSRSSL
LCDIFESFIGALYLDQGKEAVVDFVTKVIFVKLDQGWFEQEVDYKTKLQEFLQQHGDVVI
DYEVVSETGIESDRVYTVAVSADDQLIGEGNGTSKKRAEVQAAKNALSKLQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaataaaagcattagaagaacatttagaaaaaacatttggaattcactttaat
gattccagtttattggcggaagcttttacacaagcctcatatgttaatgaacatccaaaa
gaaaatttaaaatattatgaacgtattgagttcttaggtgatgcggtcatgcaattaact
gtttcagagtatatttatcaacgctatccagaaatgccacaaggaaaattatcaagatta
agaattgcgatggttcaagaagatagttttagtaagtttgccttggaatgtcaatttgat
cagtttattcggttaggtaaaggtgaggaaaaagctggggctcgtagtcgctcatcgtta
ttgtgtgatatttttgaatcatttatcggtgcattatatttagatcaaggtaaagaggcc
gtggttgattttgtgactaaggtgatctttgttaaattagatcaaggctggtttgaacaa
gaagttgattacaaaactaagctacaagaattcttgcaacaacatggagatgtggttatt
gattatgaagtcgttagtgaaaccggcatcgaaagtgaccgtgtttatacagttgcagtt
agtgctgatgatcaattaattggtgaaggtaatggaacttctaaaaagcgggctgaggtg
caagctgcaaaaaatgcattatcgaaattacaataa
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