Paucilactobacillus oligofermentans: LACOL_0952
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Entry
LACOL_0952 CDS
T06755
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lol
Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_0952 (hup)
03036 Chromosome and associated proteins [BR:
lol03036
]
LACOL_0952 (hup)
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0952 (hup)
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LACOL_0952 (hup)
Chromosome and associated proteins [BR:
lol03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LACOL_0952 (hup)
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LACOL_0952 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
DUF2780
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CUS26260
UniProt:
A0A0R1REQ4
LinkDB
All DBs
Position
I:complement(970388..970663)
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AA seq
91 aa
AA seq
DB search
MANKAELVNDVAAATGLTKKDATAAVDAVFGSVQSSLSKGEKVQLIGFGNFEVRQRAARK
GRNPQTGEEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattagttaacgacgttgcagctgcaactggtttaacaaagaag
gacgcaactgcagcagtagatgctgtatttggttcagttcaatcatctttatctaagggt
gaaaaggtacaattgattggtttcggtaacttcgaagtccgtcaacgtgctgcacgtaaa
ggacgcaatcctcaaactggggaagaaatccaaattcctgcaagcaaagtaccagcattt
aagccaggtaaggctttgaaggacgctgttaaataa
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