Paucilactobacillus oligofermentans: LACOL_0986
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Entry
LACOL_0986 CDS
T06755
Name
(GenBank) Endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACOL_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_0986
Enzymes [BR:
lol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LACOL_0986
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LACOL_0986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CUS26294
UniProt:
A0A0R1RD62
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All DBs
Position
I:complement(1005442..1006338)
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AA seq
298 aa
AA seq
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MLIGSHVGFKAPNMLLGSAEEAVSYGSSTFMFYTGAPQNTRRKPLEELNIEQGSAYIKAH
HLTNLVVHAPYIVNLANPTKPDKFAFGVEFLTEEVRRSQALGATEITLHPGSHVGAGEEA
GIASLIKGLNEVLTSNEGPQIAIETMAGKGNEVGITFEQIAKMIDGITYNDRVSVTFDTC
HTSDAGYNIKDDFDGVLNEFDHVIGIDRLKVLHLNDSKNPQGSHKDRHANIGMGEIGFTA
LNQIANHPQLESVPKILETPYVPVDEKNKVAPYKEEIAMLKAGQFDADFIDKIVNNAK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttaattggatctcacgtaggctttaaagcacctaatatgttgcttggatctgctgaa
gaagcggttagttatggatcttcaacgtttatgttttacactggcgcacctcagaataca
cgacgtaagccactggaagagttaaatattgaacagggcagtgcatatattaaagcacat
catctaactaacttagtcgtgcatgcaccgtatattgttaatttggctaacccaactaaa
ccggataagtttgcatttggtgttgaatttttgactgaagaagttcgtcgttcgcaagct
ttgggtgcaacggagattacattgcatccaggatcacatgttggtgccggagaagaagct
ggaattgcctctttgattaaaggccttaatgaagtgttaacgtctaatgaaggacctcaa
attgcgattgaaaccatggctggcaaaggcaacgaggttggaattacttttgaacaaatt
gccaaaatgattgatggaattacatacaatgatcgagtttcagtaacctttgatacatgt
catactagtgatgctggatataacattaaagatgattttgatggagttttaaatgaattt
gatcatgtgattggtattgatcgcttgaaggttttacatttaaatgattctaaaaatcca
caaggtagtcataaagatcgacatgctaatattggaatgggcgaaattgggtttactgcg
ttaaaccaaattgcgaatcatccacaattggaaagtgtacctaagattttagaaacacca
tatgtaccggttgatgaaaaaaataaggtagcaccttataaggaagaaatcgcgatgttg
aaagctggccaatttgatgccgattttattgacaaaattgttaataatgctaaataa
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