KEGG   Paucilactobacillus oligofermentans: LACOL_1059
Entry
LACOL_1059        CDS       T06755                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lol  Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:lol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lol03016]
    LACOL_1059 (truB)
Enzymes [BR:lol01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LACOL_1059 (truB)
Transfer RNA biogenesis [BR:lol03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LACOL_1059 (truB)
 Prokaryotic type
    LACOL_1059 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: CUS26367
LinkDB
Position
I:complement(1079442..1080347)
AA seq 301 aa
MNGIIPLFKERGMTSHDCVSKLRKILHTKKVGHSGTLDPNVDGVLPIAIGSATKVVELLM
ESGKMYKGELLIGYATDTQDLDGEIIETKSLTQAFTDEQIIEQMKQLTGDIIQIPPMYSA
IKVNGRKLYEYARAGETVERPERHINISRFDLVSSTYDADSQQQRVRFEAECSKGTYIRT
LAVDLAARLGYPGVMSDLTRVKSGGFTINQAVKLAEVQAAMDNETIDELLNPIDIVLTQY
PKINLTDIQWKGVQNGMWMRLSEIDSEAETVAMRYHNEIKALYLRHDAENCYKPLKMFSV
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaatggaattattcccttatttaaagaacgcggtatgactagtcacgattgtgttagt
aagttacgtaaaattttgcatacaaaaaaagttggtcattcaggaaccctggatcccaat
gttgatggcgttttaccaattgcaattggtagtgcaactaaagtagttgagctattgatg
gaatctggcaagatgtacaaaggtgagttattaattggttatgctactgatacgcaagac
ttagatggagaaattattgaaactaagtctttaactcaggcatttactgatgaacaaatt
atcgaacaaatgaaacaattaactggtgatattattcaaattccaccaatgtattcggca
attaaagttaatgggcgaaaattgtatgagtatgcgcgtgcgggtgaaacggttgaacga
ccagagcggcatattaatatttctcgttttgatttggtatcatcgacttatgatgctgac
agccagcaacaacgagttagatttgaagctgaatgtagcaaaggaacatatattcgaacc
ttagcagttgatttggcagcacgcttaggttatcctggcgtgatgagtgatttaacgcgt
gttaagagtggtggctttacaattaatcaagcggtaaaattagctgaagttcaagctgcc
atggataatgaaaccattgacgaactattaaatccgattgatattgtcttaactcaatat
ccaaaaattaatttaacggatatacaatggaaaggcgttcaaaacggtatgtggatgcgt
ctatctgagattgatagtgaagcagaaaccgttgcgatgcgttatcacaatgaaattaaa
gcgttatatttacgacatgacgcagagaactgctataaaccactgaagatgttttcagtc
aaatag

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