Paucilactobacillus oligofermentans: LACOL_1244
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Entry
LACOL_1244 CDS
T06755
Name
(GenBank) Ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACOL_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_1244
Enzymes [BR:
lol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LACOL_1244
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
LACOL_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
RAP
Motif
Other DBs
NCBI-ProteinID:
CUS26552
LinkDB
All DBs
Position
I:1264914..1265828
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AA seq
304 aa
AA seq
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MQEVIKVNNATLKQMNSHYASNQQVPPVGALFRVKQGGTIITGYNSGKVMFQGTNVTSEV
SKWGKPTTSTNKASFPKATNSTLPSGFDTWSVIGSDEVGTGSYFGPLTVASVYVTSENIE
TVRKLGIQDSKKLTDPEIVKMAKQLITFLPYHVVNIMPTKYNQMIEKYNQGQLKALCHNL
ALTNVLKKIQPEKPQAILIDQFVAPSTYYRYLKGQSIIHENVYFQTKGEQAHLAVAAASV
IARYVSLEAMDELTANAGITLPIGAGNAVDQIAAKLIRQGKPLADYAKLHFANTQKAQAI
ADNK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagtaattaaagtaaataatgccactttaaaacaaatgaatagccattacgct
agcaaccaacaagtcccaccagttggggctttgtttcgcgtaaaacaaggtggcaccatt
attactggctacaattccggtaaagttatgtttcaaggcaccaatgttacctccgaagta
tcaaaatggggtaaacctactacctcaacgaataaagctagctttccaaaggcaactaat
agtacattaccgtcaggttttgatacttggtcagtaattggctccgatgaagttggcacc
ggtagttactttggaccattaacagttgcttcagtttacgtaactagtgaaaatattgaa
accgttcgtaaattaggtattcaagattcaaagaaattaactgatccagaaatcgttaaa
atggcaaaacaactcattacttttttgccttaccatgtcgttaatattatgcctactaag
tacaatcaaatgattgaaaaatataatcaaggacagttaaaagccctttgccataattta
gctttaacaaatgttttaaaaaaaattcaacctgaaaaaccgcaagcaattttaattgat
cagtttgttgccccaagcacctattaccgttaccttaagggccaatcaattatccatgaa
aatgtctactttcaaactaaaggtgaacaagctcatcttgctgtagcggctgcatcagtg
attgcccgttacgtttcactcgaagctatggatgaattaacagcgaacgcaggaattacc
ttaccgattggtgctggtaatgcagttgatcaaattgccgctaaattaattcgtcaagga
aaaccactggcagattatgctaaattgcattttgctaatacacaaaaagcccaagccatt
gctgataacaaataa
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