Paucilactobacillus oligofermentans: LACOL_1358
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Entry
LACOL_1358 CDS
T06755
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03030
DNA replication
lol03430
Mismatch repair
lol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACOL_1358
03430 Mismatch repair
LACOL_1358
03440 Homologous recombination
LACOL_1358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lol03032
]
LACOL_1358
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_1358
Enzymes [BR:
lol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACOL_1358
DNA replication proteins [BR:
lol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACOL_1358
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACOL_1358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
CUS26669
UniProt:
A0A0R1RLY2
LinkDB
All DBs
Position
I:1387873..1388409
Genome browser
AA seq
178 aa
AA seq
DB search
MNFVAIDFETANAKRYSACSVALTVVRENKIVDEFYSLIKPPTDFFWRNVQIHGIHEEDV
ANAPSFTDIWDHIDSFFGENKLVIAHNAPFDNSVIKSSLDYYGIERPNYLTLDTVKTSKE
FFPDLPNHKLDTVCDKLNITLDHHHNALDDSQACANILLYQATHFGTQPIKPFVKAAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgttgctattgattttgaaactgccaatgctaaacgatatagtgcttgttca
gttgcactaactgtcgtccgtgaaaataaaatagttgatgaattctattcactaattaaa
ccaccaactgattttttttggcgaaacgttcaaattcatggtatccatgaagaagatgtt
gccaatgccccctcattcactgatatttgggaccacattgattctttctttggtgaaaat
aaacttgtaattgcacataatgcaccttttgataatagtgtcattaaaagcagtctcgat
tattatggtattgagagaccaaattatctaactttagatacggttaaaactagtaaagaa
tttttcccagacctgcctaatcataaacttgatactgtttgcgataaattaaacattaca
ctcgaccaccatcataatgcattagatgatagtcaagcttgtgccaatatcttgctttac
caagcaactcattttggtactcagcccatcaaaccttttgttaaagcagctaaataa
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