Paucilactobacillus oligofermentans: LACOL_1385
Help
Entry
LACOL_1385 CDS
T06755
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
lol
Paucilactobacillus oligofermentans
Pathway
lol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LACOL_1385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lol03400
]
LACOL_1385
DNA repair and recombination proteins [BR:
lol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACOL_1385
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LACOL_1385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_30
CCDC61_coil
AAA_22
AAA_5
AAA_16
UB2H
AAA
ZYG-11_interact
DUF8652
Motif
Other DBs
NCBI-ProteinID:
CUS26697
UniProt:
A0A0R1RL44
LinkDB
All DBs
Position
I:complement(1415083..1417086)
Genome browser
AA seq
667 aa
AA seq
DB search
MIYRQEDKDFELVSPYQPTGDQPAAIKELTDGIESGEKAQILLGATGTGKTFTISNVIKN
VNKPTLILSHNKTLAGQLYGEFKQFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSAI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPNEYRDHALSLRVGMDIERNQLLRE
LVDIQFERNDIDFQRGRFRVHGDIVEIFPASRDERALRIEFFGDEIDRIREVDSLTGEVV
GDRDHVSIFPATHFMTNDEIMGTAIDNIQTELEDRLKVLDKEGKLLEAQRLKQRTEYDIE
MMREMGYTSGIENYSRHMDGRKPGEPPYTLLDFFPDDFLLIVDESHQTMPQVRGMYKGDR
SRKQMLVDYGFRLPSALDNRPLQLPEFEKHINQVVYMSATPGPYEYEKTDKVVQQIIRPT
GLLDPEIEVRPVMGQIDDMVGEINLRIERNERVFITTLTKKMSEDLSDYLKDLGLKVKYL
HSDIKTLERTQIIRDLRLGKFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNENGKVIMYADKVTDSMKAAMSETERRREIQEAYNKEHGITPHTIKKEIRDL
ISSVKETEDTGTQDQFTEQDFADMAKDDQKEMVKQLEEQMKAAAKRLDFEQAATLRDTVM
ELKSQIG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcgtcaagaagataaagattttgaacttgtatcaccatatcaaccaactggt
gatcaacctgctgcaattaaagagttaactgacggcattgaatctggtgaaaaagcccag
attctattgggggcaactgggactgggaaaacatttacgatctcaaatgtaatcaaaaat
gttaataaaccaactttgattttgtcgcataacaaaacactagctggtcagctgtatgga
gaatttaaacaattttttcctaataatgcggttgaatattttgtcagttattatgattat
tatcaacccgaagcttatgttccttcaagtgatacctatattgaaaaggattcagcgatt
aatgatgaaattgataaattacgacattcagctaccagttctttattagaacgtaatgat
gtgattgtagtagcttctgtatcaagtatttttgggttaggtgatcccaacgaatatcgt
gatcatgccttatctttgcgtgttggaatggatattgaacgtaaccaattattacgggaa
ttggtcgatattcaatttgaacgtaatgatattgattttcaacgtggtcgtttccgagtg
catggggatatagttgaaattttcccggcatcacgtgatgaacgagccttaagaattgaa
ttttttggtgacgaaattgatcggattcgagaagttgattcattaacaggtgaagttgtt
ggtgatcgtgatcatgtatcaattttcccagctactcattttatgactaatgatgaaatt
atgggaaccgcaattgataatattcaaactgaacttgaagatcgactcaaagtgttggat
aaagaaggaaaattattagaagcacaacgcttgaaacaacgaactgaatatgacattgaa
atgatgcgtgaaatgggatatacatcggggattgaaaactattctcgacatatggatggt
cgaaaaccaggtgaaccaccatatacattattagatttctttccagatgactttctatta
attgttgatgaatctcatcagacgatgccacaagtccgggggatgtataaaggtgatcga
tcacgaaaacaaatgttagttgattatggctttcggttaccaagcgcgttagataatcga
ccattacaattaccagagtttgaaaagcacattaatcaagtggtttatatgtcagcaact
ccaggtccatatgaatatgaaaaaacggataaggttgtacaacaaattattcggccaacc
gggttacttgatcctgagattgaggtccggccagttatgggtcaaattgacgatatggtt
ggtgaaattaatcttcgtattgaacgtaatgagcgagtatttattacaacgctgactaaa
aaaatgtcagaagatttaagcgattatcttaaagatttgggattgaaagtaaaatatttg
catagtgatattaaaacacttgaacggacacaaattattcgtgatttacgattaggtaaa
tttgatgtcttagtgggaattaatttgttacgtgaaggaattgatgtaccagaagtttct
ttagtggcgattcttgatgctgataaagaaggctttttacgtaatgaacgatcattaatt
caaacgattggtcgagctgcgcgaaatgaaaacggtaaggttattatgtatgctgataaa
gttactgactcaatgaaggcagcaatgagtgaaactgaacgccgtcgtgaaattcaagaa
gcctataataaagaacatgggattacaccacatacaattaaaaaagaaatccgtgattta
atttcaagtgtcaaggaaactgaagatactgggacacaggatcaatttactgaacaagat
tttgctgatatggcaaaagatgatcaaaaagaaatggttaagcaattggaagaacaaatg
aaagcagcagccaagcggcttgattttgaacaagcggcaacgcttcgcgatacggtgatg
gaacttaaatcacaaatcggctaa
DBGET
integrated database retrieval system
