Leeuwenhoekiella obamensis: FRT2_02110
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Entry
FRT2_02110 CDS
T12104
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lom Leeuwenhoekiella obamensis
Pathway
lom02024
Quorum sensing
lom03060
Protein export
lom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FRT2_02110 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FRT2_02110 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRT2_02110 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system
FRT2_02110 (ffh)
Enzymes [BR:
lom01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FRT2_02110 (ffh)
Secretion system [BR:
lom02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FRT2_02110 (ffh)
Eukaryotic Sec-SRP protein
FRT2_02110 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
CbiA
AAA_17
CLP1_P
AAA_33
APS_kinase
ATPase
KTI12
KAP_NTPase
AAA_31
6PF2K
TsaE
AAA_16
AAA
AAA_18
ATP_bind_1
NACHT
NPHP3_N
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BFF68570
LinkDB
All DBs
Position
232804..234132
Genome browser
AA seq
442 aa
AA seq
DB search
MFDSLSDKLDKALHVLKGHGQITEINVAETLKEVRRALVDADVNYKIAKDFTNTVKEKAL
GQDVLSSLKPGQLMVKLVKDELTNLMGGDAEGITLSGSPSVILMSGLQGSGKTTFSGKLA
NFLKTKKTKKPLLVACDVYRPAAIDQLHVVGEQINVEVYSDREQKDPVKISQDAIAHAKA
NGHNVVIIDTAGRLAVDEAMMTEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDTLN
FDGVVLTKLDGDTRGGAALSIKTVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVV
SLVERAQEQFDEDEARKLQKKIAKNQFGFDDFLKQIQQVKKMGSMKDLLGMIPGAGKALK
GMDIDDDAFKHIEAIIHSMTPAERADPKIINASRKKRIGKGSGTSVQEVNQLLKQFGQMS
KMMKMMQGGGGRKMMQMMQQMK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatagtttaagtgataagttagacaaggcgttacatgtgctgaaagggcacggg
cagattaccgagatcaacgttgcagaaacccttaaggaagtgcgtcgcgcacttgtggat
gctgacgttaactataagatcgcaaaagattttacaaatacggtaaaagaaaaagcacta
ggacaagatgtacttagtagcttaaagcctggtcaacttatggtaaagcttgttaaagat
gagcttacaaacttgatgggtggcgatgcagaaggtatcacattatctggtagccctagc
gtgatcttaatgtctggtctgcagggttctggtaagactactttttctggtaagctggcc
aatttccttaaaactaaaaaaactaaaaaaccacttcttgttgcttgtgacgtttaccgt
cctgcggcgatagatcagctgcatgtagtaggtgagcagatcaatgtagaggtttactca
gatcgagagcagaaggatccagtgaaaatttctcaggatgctatcgctcatgctaaagca
aatggtcataatgtagtgatcatcgatacggcgggtcgtcttgctgtagatgaagccatg
atgaccgaaatatcaaacattcacaaagctatccagccgcaagaaacactatttgtggta
gactctatgacgggtcaggatgctgtgaacacagcaaaagcctttaacgatacacttaat
tttgacggagttgttctaacaaaattagacggtgatactcgcggtggtgctgcgctttct
atcaaaacggttgtaaacaaaccgatcaaattcatcggtacaggtgagaagatggatgcg
atagatgtgttctatccatcacgtatggcagatcgtattcttgggatgggagacgttgtg
tctcttgtagaacgagctcaagagcaatttgatgaagatgaggcacgcaagctgcaaaag
aagatcgcaaagaatcaatttggttttgacgatttcttaaagcagattcagcaggttaag
aaaatgggtagcatgaaggatcttcttggtatgatcccgggtgctggtaaagccttaaaa
gggatggatattgacgatgacgcttttaaacatattgaggcgatcatccatagtatgacc
ccagcagaacgtgctgacccaaaaatcataaatgcaagtcgcaaaaaacgtatcggtaaa
ggtagcggaacatcagttcaggaagtgaaccaattgttgaagcaatttggtcaaatgagc
aaaatgatgaagatgatgcaaggtggcggtggccgcaagatgatgcagatgatgcaacaa
atgaagtag
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