Limosilactobacillus oris: AYI71_00860
Help
Entry
AYI71_00860 CDS
T04391
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lor
Limosilactobacillus oris
Pathway
lor03420
Nucleotide excision repair
lor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYI71_00860
03430 Mismatch repair
AYI71_00860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_00860
Enzymes [BR:
lor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYI71_00860
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYI71_00860
MMR (mismatch excision repair)
Other MMR factors
AYI71_00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
AAA_30
AAA_12
NACHT
DEAD
DUF7528
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AMS07487
LinkDB
All DBs
Position
178439..180754
Genome browser
AA seq
771 aa
AA seq
DB search
MEAGEQRAEQARVDQVEREIKRQVATAEQAVDEAHQETRAVEKNYSENASINRYEVDDIA
ESRSELEQQRRLVSQAAENENIIKHQLRTLQNLQGSPYFGRIDILDPGEDEPERLYIGTA
SLMNSDRTDFLIYDWRAPISGVYYNGTLGKVQYETPAGTQSTELVKKRQFTIKDGRITNM
FDTNETVGDELLQAALGAQNDQYMHNIVATIQQEQNDIIRNTSSDLLLVQGVAGSGKTSA
ILQRIAYLLYHSRADLNADQIVLFSPNNLFSHYISEVLPSLGERNMRQVTLAGFLRRRFE
GLQVETLFDRYEERQSEATAAHAAADFLESATVMTAVRQYVHQLPVDQVQFANLTFNSQV
FFSADHIRELYQRLPASLSAADRLAQLKNKLIRELQHRVREEAKKDWVAKALDELDVQQL
HSLYGQQSVDDFKDEEAQYAYLARKLAKRRLRVVADAIYNNYFIDFYNQYERFLRQVDLP
QTISNRDWIGVLTDYQNEIEYHRIKLMHTAPLLYLRDLMTGSGQNRSFQYVFIDEMQDYP
LATLVYLRHAFPRAKFTVLGDSEQALFKPLQLPGAMLKELRTVLDAKHPQLISLNRSYRS
TAEITDFAKALLPDGEQIVSFTRHGEKPRLLVRYDEASFNQALVETIIQQRADYETVAVL
TKNREQAQAIYRFLHQRQLGDLHLLTARDSDLPAGILVLPVYLAKGLEFDAVIAADVSTA
NLQNVDAVGMVYTMATRAMHHLTLLSKGAVTRAINSAASQQLVIEHEFTDK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggagaacaacgggcggagcaagcgcgggtggaccaggtcgagcgggagatc
aagcgccaggtcgccactgctgaacaggcggttgacgaagcccaccaggaaacccgggcg
gtcgaaaagaattatagcgaaaacgcctcgattaaccgctacgaagtcgatgatattgcc
gaatcgcggtcggagctggaacagcaacggcggctggtctctcaagcggcggaaaatgaa
aacatcatcaaacatcaattgcggaccctgcaaaatcttcaggggtccccatactttggg
cggattgacatccttgacccgggcgaagatgaaccagaacgcctgtatatcgggactgcc
tccctcatgaacagcgaccggacggactttttgatctatgattggcgggcgcccatctcc
ggagtttactataacggtaccctgggcaaggtgcagtacgagacaccagctggtacccag
tcgaccgagctggttaaaaagcggcagttcaccatcaaagacgggcggatcacgaacatg
ttcgataccaatgaaacggtaggggacgagctgcttcaggcagcgctgggagcccaaaat
gaccagtacatgcacaacatcgtggcaacgattcagcaggagcagaatgacattatccgc
aacacgagcagtgacctcttgctggtgcaaggggtggccggttctgggaaaacctcggcg
attttacagcggattgcctacctgctttaccacagccgggctgacctgaacgctgaccaa
atcgttttattcagtcccaacaacctctttagccactatatctcagaggtcctgccgagt
ctgggagagcggaacatgcggcaggtaacgttggcgggctttttgcggcgccgctttgag
gggctgcaagtagaaaccctctttgaccgctatgaagagcggcaaagcgaagcaacggct
gcgcacgcggcagctgactttctcgaaagtgccacggtgatgacggcggtgcgccagtac
gttcaccagttgccggttgaccaggtacagtttgccaacctgacttttaacagccaggtc
ttcttcagtgcggaccacattcgggagttgtatcagcgtttgccggcctctttgtcggca
gctgaccggctggcccagctgaaaaacaagttgattcgtgaacttcagcaccgggttcgg
gaggaggccaagaaggattgggttgccaaagctcttgacgaattagatgttcagcagttg
catagcctctacggtcaacagtctgtcgacgatttcaaggacgaagaggcccaatatgcc
tacctggcccgtaaactggcgaagcgccgcctgcgggtagttgcggatgccatctacaat
aactatttcatcgacttttacaaccagtatgaacggttcctgcggcaggtggacctacca
caaacgattagcaaccgggactggattggggtgcttactgactaccaaaatgaaatcgag
taccaccggattaagttgatgcacaccgcgcccttattgtacttgcgggatttaatgact
ggcagcggtcagaaccgctccttccaatacgtatttattgatgaaatgcaggactacccc
ctggcaaccctggtctacctccgccacgcctttccccgggccaagtttactgtgctcggc
gacagtgagcaggccctgtttaagcctctccagctccctggggccatgttgaaggaactg
cggacggtgctggatgccaagcacccgcagttgatttctcttaaccgcagctaccggtca
accgcggaaattaccgattttgccaaggcactgctgccggacggcgaacaaatcgtttcc
tttactcggcatggtgaaaagccccgtttgctggtgcggtatgacgaggccagctttaat
caggccctagtggaaaccatcatccaacagcgagcggactacgaaacggtcgcggtcctg
actaagaaccgggagcaggcccaggcaatctaccgtttcctgcaccagcgccaactggga
gatttgcacctgctaaccgcccgggatagtgacctgccagcgggaatcctggttttaccg
gtgtacctcgctaaggggctggagttcgacgcggtcatcgctgcagatgtttccaccgcc
aacctgcagaacgtggatgctgtcgggatggtttacacgatggcgacccgggcaatgcac
catttgactttgttgagcaaaggagcggtaacgcgagcgattaattctgccgcgagtcag
caactggtgatcgaacatgaatttacagataaataa
DBGET
integrated database retrieval system
