Limosilactobacillus oris: AYI71_01315
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Entry
AYI71_01315 CDS
T04391
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
lor
Limosilactobacillus oris
Pathway
lor02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AYI71_01315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lor03021
]
AYI71_01315
Transcription machinery [BR:
lor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYI71_01315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
ComGF
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AMS07564
LinkDB
All DBs
Position
274917..276059
Genome browser
AA seq
380 aa
AA seq
DB search
MAKSKKKDLVISNSEDFDQQEYDTAVGKLIRQYKKQKEIQYDVLTDKLAKPYELNADGID
NLLQNVEDAGISVVDANGDPDPRALKATEKLSQNAMEDTSAPTGVKINDPVRMYLKEIGR
VNLLTADEEVKLALRIEQGDEVAKQQLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGL
MKAVEKFDYRRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQ
DLGREPLPEEIGAEMDMPTEKVRNILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPA
DHAAYEMMKKQLENVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEA
KALRKLRHPSRSKQLKDFLE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagtaagaagaaagaccttgttatttctaatagcgaagattttgaccaacaa
gaatacgatactgctgttggtaaattgattcgccagtacaaaaagcaaaaggaaatccaa
tacgatgtgctgacggacaaacttgccaagccgtacgaactgaacgcggatggtattgac
aacctcctccaaaacgttgaagatgccgggatcagtgtggttgatgccaatggtgaccct
gatccacgggcattgaaggcaaccgaaaaactttcccaaaatgcgatggaggatacgtcc
gcaccgaccggtgtcaagattaacgaccccgttcggatgtacctcaaggagattggtcgg
gtcaacctgctgacggctgatgaagaagttaagctcgccctccggattgaacagggggat
gaggtcgctaagcaacagctggcagaagcaaacctgcggctggtggtctccattgccaag
cgttacgtcggtcggggaatgcagttcctagacctgattcaggaagggaacatggggctg
atgaaggccgtcgagaagttcgactaccggcggggctttaagttttccacttacgctacc
tggtggatccgccaggcgattacccgggcgattgccgaccaggcgcggacaattcggatt
ccggttcacatggtggaaacgattaacaagctaatccggattcagcggcagctcctgcag
gacctcggtcgggaaccattgccagaggaaatcggggcagagatggacatgccaacggaa
aaggttcgtaacatcctcaagattgcccaggaaccggtttcgctggaaacgccgattggc
gaagaggatgactcccacctgggcgactttatcgaggaccaggatgcgacgagtccagct
gaccacgcggcttacgaaatgatgaagaagcagttggaaaatgtcctggatactttaacc
gaccgggaagaaaacgtcctgcggctacgttttggtctcgacgacgggcggacccggacc
ctggaagaagttgggaaggtcttcggtgttacccgggaacggattcggcaaattgaagcg
aaggctttgcggaagctgcgtcacccatctcgttctaagcagctaaaggactttttagag
tag
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