Limosilactobacillus oris: AYI71_05170
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Entry
AYI71_05170 CDS
T04391
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lor
Limosilactobacillus oris
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_05170
Enzymes [BR:
lor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYI71_05170
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYI71_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_30
ResIII
PhoH
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMS08232
LinkDB
All DBs
Position
complement(1055102..1059262)
Genome browser
AA seq
1386 aa
AA seq
DB search
MADFKPTPAQQQAISDRDQNIIVSASAGSGKTAVLVNRAVDLIKEGRATVDRMLLVTFTD
AAAKNMRDKIRQRMQEVAQAEPRLRDLMNEQVNRLAVADISTIHAFCLKLIKRYYFLIGL
DPQFRLLTDDTERLLLQEDVLHQVNEQFYASADEESDDAASFGQLVLNFSSDRDDQGLND
LVLKLMEIANAQPDPEQWLAQLPTSYQLNGPVLDSAFYQHQLLPLVLQRLDQLCHDFAEL
TQRADQEGLSKAREVLEDDQAVLTQLQAALDPAHLTSDQLQAILGGVSFGSFSGRPKKGA
AGYDDFKALNQERNQLKKEWPTVAATVADKDAALAQLDQFSARFQGLRDRAVAAQLDDKT
LISLDKDLQQFAQARQLLVPNSWNAVRAIIRGAKFRTMAGKPKGDPVAADVYATLTASRQ
ALKKQLTGIQDSFFAYDEDQFQEISHQSQRLLTKLSQVTVAFHRAYQQVKLSRHVLEFSD
LEHYAYQILTPPADQPDWQELVANLQRHYQEIMVDEYQDTNRLQEAILTRLTNPAQHNMF
MVGDVKQSIYRFRQADPSLFLHKYQRYRQPGAGDEAIVLGENFRSMSNVTDFTNLLFAQL
MGADVGEIEYDQAAHLKYAATYYETADNQPRPTEILLYDANADQDAIKESPDQHEDDKLA
GELKMVGMRIKQMVANEEQIFDPATQQLRPVNYGDIVLLERTKSINNTLMEEFSKLEIPL
TVHDVESYFQATEVRVMMALLRLIDNPHQDIPLVAVLRSPLVGLSTKELAFIRLQNRSAN
YYGALQTFKSNYANADRHLIKLELLNAAATADQPDPVADLYDKVSHFLDQLATFRQTAQQ
QSLVDLIWQIYNETGYLDYVGAMPGGAQRQANLHAFYQRAHDYEQSSFKGLYQFIRFIEK
MQEHDKDLGVAPTQLVKNTVNVMTIHGSKGLQFPIVFLIDATHGFNQQATRETAVVDAVN
KVGIEYTDPEEVRYDTPQRQAIISAVQQGERAEDLRVLYVALTRAEQRLIITGSFNEENR
RQNLASAWTRWQKAFQSPATLLGPQLRVNARSFMDWIGLALTRSTEFRAKQVAPAGMELD
ESAMADYQHYQPLFAGQRFTVGCYTAADVTEKLASLQEQREETVLTDQTAIDQEQLKQIK
QLLEARYPYQVATKTTAYQSVTDVKRLFEYPDNAVEAQWDYEQQQREKQAQGIYFNNHFA
EPAFIKQADEQPAATTIGTATHLVFQKLPLTAGEVSPTLVADEVQRLVDQGLMTPAVAAK
INVTGVARFFQTAVGQQVLAAPEHYHREEPFAMVMNGAELFKEIKTSDQEQVLLHGIVDG
YLETPTGIILVDYKTDHLRPGFGEAEIVDRYRGQLNLYKEALGLMKPLPVVQMGLYLVES
EQFITI
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttaagcccaccccggcccaacaacaagcaatcagtgaccgggaccagaac
attatcgtgtccgcgtcggccggctcggggaaaaccgccgtgctcgtcaaccgggccgtg
gacctgatcaaggagggccgggcgacagtcgatcggatgctgttggtgacctttaccgac
gcggccgccaagaatatgcgggacaagatccgccagcggatgcaggaggttgcccaggct
gaaccccgcttgcgggacctgatgaatgaacaggtcaaccggctagcggtggctgacatc
agcaccattcacgccttctgtttgaagctgatcaaacgctactacttcttaattggcttg
gacccgcaatttcgcctgctgaccgatgataccgagcgtctcctgctccaggaggacgtc
ctccaccaggtcaacgaacaattttacgcgtcggccgacgaggaaagtgacgatgccgcc
tcctttggccagctggtgcttaatttttctagtgaccgggacgaccagggtttaaacgac
ctagtcctcaaactgatggagattgccaacgcccagccagatcccgagcagtggctggcc
cagttgccaaccagctaccaactcaatggtccggtgctcgactcggccttttaccaacac
cagctcctgcccctggttctgcaacggcttgaccagctctgccacgactttgcggagttg
acccagcgtgctgaccaggaggggctgagtaaggcccgggaagtcttggaagatgaccag
gcggtcctgacccagctccaagcggccctcgacccggcccacctgaccagcgaccagctc
caagccatccttggcggagtgtcgtttggcagctttagtgggcggccgaaaaagggggcc
gctggctatgatgactttaaggccctcaaccaggagcgcaaccagctgaaaaaggagtgg
ccgaccgtagccgccacggtggcggataaggatgccgcccttgcccagctggaccaattt
agcgcccgtttccaagggttacgtgaccgggctgtagcggcccagcttgatgacaaaaca
ctgatttccctggacaaggacctccagcagtttgcccaggcccggcagctgctcgtgccc
aactcctggaacgcggttcgggcgattattcgcggggccaagtttcggacgatggcgggg
aaacccaagggggacccggtagcggccgacgtttacgcgaccctgaccgcttcccgccag
gccctgaaaaagcagctgacgggcattcaggacagtttctttgcctacgatgaggaccag
tttcaggaaatttcccaccaatctcagcgcctgctgaccaagctcagccaggtgactgtg
gcctttcaccgggcctaccagcaggttaagctgagccggcacgtcttagagttcagtgac
cttgagcactacgcctaccagattttgaccccaccggcggaccagcccgactggcaggaa
ctggtagcgaacttacaacggcactaccaggagatcatggtcgacgaataccaggacacc
aaccgtctgcaggaagcaatcctgacccggttgaccaacccggcccagcataatatgttc
atggtcggcgacgtcaagcagtccatttaccgcttccgccaggccgacccgtcactcttc
ctgcataagtaccagcgttatcgtcagccgggagccggggacgaggcaattgtcctcggg
gaaaacttccgctcgatgagcaacgttaccgactttaccaacctcctcttcgcccagttg
atgggggcggacgttggtgaaattgaatatgaccaggcggcccacctcaaatacgcggcc
acctactacgaaacagctgacaaccagccccggccgacggagatcctgctctacgacgcc
aacgcggaccaggatgccattaaggaatccccggaccagcatgaggatgacaagctggcg
ggtgaactgaagatggtcggaatgcggattaagcagatggttgctaacgaggaacagatt
tttgaccccgcgacccagcaattgcggccggttaactatggcgacattgtcctgctggaa
cggacgaagagtatcaataataccctaatggaggaattcagcaagctggaaattccgctg
accgtccatgacgttgagagctacttccaggcgaccgaggtccgggtgatgatggccctc
ctccggctgattgataacccccaccaggatatcccgctggtggccgtactccggtcgcca
ctggtgggcttatcgaccaaggagctggcctttattcgcctgcaaaaccggtcggcaaac
tactacggcgccctgcaaacctttaagagcaactatgccaatgccgaccggcacctgatt
aagctggagctgttaaacgcagcggcgacggctgaccagcccgacccggtggcggacctc
tatgacaaggtcagccactttttggaccagctggcaaccttccgccaaacggcccagcag
cagtccttggtggacctgatttggcaaatttataacgagaccggctacctggactacgtg
ggcgcaatgcctggcggggcgcaacggcaggcgaacctgcacgccttttaccagcgggcc
catgactacgaacagagtagtttcaagggcctctaccagttcatccgcttcattgaaaaa
atgcaggaacacgataaggacctgggagtggcaccgacccagctggtcaagaacaccgtc
aacgtgatgacaatccacggtagcaaggggttgcaattcccaattgtcttcctgattgac
gcgacccacggctttaaccagcaggcgacccgggagacagcggtggtcgatgccgtcaac
aaggtcgggattgagtacaccgacccggaagaggtgcgctacgatacgccccagcggcag
gccatcatcagtgccgtccagcagggggaacgggccgaagacctccgggtgctgtacgtg
gctttgacccgggccgagcaacgcctgattattaccgggtcatttaatgaagaaaatcgc
cggcaaaaccttgccagcgcctggacccgttggcaaaaggccttccagtcaccagcaacc
ctgcttggcccccagctccgggtcaatgcccggtcctttatggattggattgggttggcc
ctgactcggtcgaccgaatttcgggcaaagcaggtggcaccagcggggatggaactggac
gaaagcgctatggcggactaccagcactaccagccgctctttgccggccagcgtttcacc
gtagggtgctataccgctgcggacgttacggaaaagttagccagcctgcaagagcaacgt
gaagaaactgtgctgacggaccagactgcaatcgaccaggagcagttgaagcaaatcaag
cagctgcttgaggcgcgctacccgtaccaggtagcgacgaagaccacggcctaccagtcc
gtgaccgatgtcaagcggctctttgaataccctgataacgcggtggaggcccagtgggac
tacgagcagcagcaacgggaaaaacaggcccaggggatttactttaacaaccacttcgca
gaaccagcctttattaaacaagcggatgagcagccggcagcgacaaccatcgggacggcc
acccacttagttttccagaagctgcccttaacggcgggggaggtcagtccgaccctggtg
gcagatgaagtccaacggctcgtggatcagggactaatgaccccggcggtggcggccaaa
atcaacgtcaccggggtcgctcgcttcttccaaacggccgtgggtcagcaggttctggcg
gctcctgagcactaccaccgggaagagccttttgcgatggtgatgaacggcgcggaactc
tttaaggagatcaagaccagcgaccaggagcaggtcctcctccacgggatcgttgacggc
tacctggagacgccgactggcattattctagtggactacaagaccgaccacctgcggccc
ggctttggggaagcggagattgttgaccgctaccgggggcagttaaatctttacaaggag
gccttagggctgatgaaaccacttccggttgttcaaatgggcttatatctggtagaatca
gaacagttcataacaatttga
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