Limosilactobacillus oris: AYI71_06750
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Entry
AYI71_06750 CDS
T04391
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lor
Limosilactobacillus oris
Pathway
lor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYI71_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lor03019
]
AYI71_06750
Messenger RNA biogenesis [BR:
lor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYI71_06750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
YycC
KH_2
V-ATPase_G_2
Motif
Other DBs
NCBI-ProteinID:
AMS08502
LinkDB
All DBs
Position
complement(1342725..1344284)
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AA seq
519 aa
AA seq
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MNAISLLIAAVAIVVGLIAGYVGRKIVFEQRLTQAKENAAGIIATAQKEAATAKKEAILE
AREESHRYREGVEQELKDRRSEVQKQEERLLQREATLDRKDTSLENRETTISARERKLDQ
KTEQIQKRQQQAADLVEQRQAELEKVAQLSHEEAKKRLLSQLKEELQSERETMIRQSEQE
AELTAEKNAKDLIVAAIQRSAADMVQETTVTVVTLPSDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGFDPVRREIAKMALERLIQDGRIHPARIEEAVERARKDMDAQLRE
VGEQTVFDLGLHTMHPDLIKTVGRMKYRTSYGQNVLQHSIEVAKLAGIMAAELGEDVTLA
KRAGLLHDIGKAIDHEVDGSHVELGVELTRKYKENKVVINTIASHHGDVAPTSIIAVLVQ
AADAVSGARPGARSESLEQYIQRLKKLEELANQNSGVDHSYAIQAGREIRVIVKPTKVSD
KQAVTLARDLKQEIEKQLEYPGHIKVTVIRETRAVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaatcagcttattaatcgccgctgtcgctattgttgtcggtctaattgccggt
tacgtgggtaggaaaatcgttttcgaacaacgattaacccaggcgaaggaaaacgccgcg
gggattattgcaactgcccaaaaggaggcggcgacggcgaaaaaggaggccattttagag
gcccgagaagaaagccatcgctaccgggaaggcgtggaacaagaactcaaggaccgtcgt
agtgaggtccaaaaacaagaagagcgcttgctccaacgcgaagcaacccttgaccgcaag
gacaccagtctggagaaccgcgaaactacgatcagcgcccgggaacggaagctcgatcaa
aagacggagcagattcaaaagcgtcaacaacaggcagcggatttagtcgagcagcgccaa
gccgagctcgaaaaggtcgcccagctatcacacgaagaggccaaaaaacggctcctttcg
caactaaaagaagagttgcaaagtgaacgggaaacgatgattcgtcaaagcgaacaagaa
gccgaattaacggcggaaaagaacgccaaggacttaatcgtggccgcaattcaacgctca
gctgcggatatggttcaagaaaccaccgtgaccgtcgtaaccctccccagtgacgacatg
aaggggcggatcattgggcgcgagggccgtaacatccggaccttagaaaccctaaccggg
atcgacctgatcatcgatgacacgccggaagcagtcgtcttatccgggttcgacccggta
cggcgtgagattgccaagatggccctggagcgcttgatccaagacggccggattcacccg
gcccggattgaggaggcggttgaacgggcccgcaaggacatggatgcccagctgcgtgaa
gttggggagcaaacggtctttgacctgggtctgcacaccatgcacccggacctgattaag
acggtcgggcggatgaagtaccggaccagttacggccaaaacgtcttgcagcactcaatt
gaagtcgccaagttagcggggatcatggccgctgagctcggtgaagacgtaaccctcgct
aagcgggccggcctcctgcacgacattggtaaggccatcgaccacgaagttgatggttcc
cacgttgaactaggggtggaactaacccgcaagtacaaggagaacaaggtcgttattaac
acgatcgcatctcaccacggcgatgtggcgccaacctcgatcattgccgtcctggttcag
gctgccgatgccgtttccggggcccgtcctggtgcccgtagtgagtcgttggaacaatac
attcaacgactcaagaagctagaggagttggccaaccaaaatagcggcgttgatcattcg
tacgctatccaggctggccgcgagattcgcgtgattgtcaaaccaaccaaggtttccgat
aagcaagcggtcaccttggcccgcgacctcaagcaagagattgaaaagcaacttgaatac
ccaggtcacattaaggtgacggtaattcgggaaacccgggccgtcgattatgccaagtag
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