Limosilactobacillus oris: AYI71_09015
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Entry
AYI71_09015 CDS
T04391
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lor
Limosilactobacillus oris
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_09015
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYI71_09015
Archaeal homologous recombinant proteins
AYI71_09015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND_NTPase5
FtsK_SpoIIIE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMS08895
LinkDB
All DBs
Position
complement(1805614..1808718)
Genome browser
AA seq
1034 aa
AA seq
DB search
MKPLKLTMHYFGPYEDTTIDFTRFDASPLYLIAGDTGSGKTTIFDAMCVALYGNASNERR
SAEMFRSDFATPKQVTEVTFLFEHKGVTYQVYRRPRQVLTMTRGKGEKQYDPKVSLVYPV
GAENPRELTKITEVNQFVQDLLGVNASQFRQLIILPQGEVQRFLMADSKTKEEILTTLFQ
TQLYTNWVTKLDERAKSMRDQTQDLTSQLKVLMGQVDGVSGQLELDQWQVAVGDLLTEKK
AELRAVTEQVTTAQKAADQLQAQLTAERRLAEDHAALVSCETQQVELKERAPQIKRLADE
NEETAWAQQHQTAYHEWQAGTTKLAELTKQQAACEQKQAAVKVRVQELTQVAERLKEQEP
AVQERQRQVANIREKLPLFEEVAALSKRLEKERRAQVEQERTVSDQTSALTKLQAELDRV
DQELQAAPDLTQAAVTIATRVQQVVRWQQAVTALGEQAKELANQEQALRDLNAQLAEAKK
TAQAAQADLKEKKKARLAAMIATLASELEEGEACPICGSTTHPHVATAVQTGQEVTEATL
DAAQAKVTKAETTLATLTTRQANQDSQLEKGRATFQDELATLCQAVASPAGDLEAATAAV
AEAVAALDHDRQELQNAQAKETENQQRQVSLTKQIQAGQAKYQELQAAVNEGRLNVNQTQ
TELVNKQGQLPAELPDLASAERWLKEEEQALADFASQQTQNQDALSRAQTQLTQLTTTSQ
QLADSAKATAAEVDQRKRELTAALAERQAAWEVFERALARVPELAARQREVNDYRQRLAS
LADRRQRLVEQIAGRPKPDVEKTAGQLKKAQVKLDQLKGAVIEQGNALTRIKEIKQQVEK
KAAKQGDTERQLRELSSLCALLKGQGGTQLGLQRYVQRHYFTEVLAVANQWLAKLTHGRY
QMHLDGEADFKGRQNKNGLEIYADDDYAGKARKVQSLSGGESFLTALALALALGEVVQRH
HGGVEIEALFVDEGFGSLDQDALGEALDTLQSLDGNRMIGIISHVTELEEQIPDQLQVIA
ENGRSKVKYHLATD
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactcaagttaacgatgcactactttgggccgtacgaagacaccacgattgac
ttcaccaggtttgacgctagcccgttatacctgattgccggcgacaccgggagcgggaag
acgaccatctttgacgccatgtgcgtggccctgtacggtaacgcctccaacgagcgccgg
tcggccgaaatgtttcgctccgactttgcgacccccaagcaggtgaccgaggtaaccttc
ctatttgaacataagggggtcacctaccaagtctaccggcggccacggcaagtcctgacg
atgacccggggcaagggggaaaagcaatacgacccaaaggtttcgctagtgtacccagtt
ggcgctgaaaacccccgtgagttgacgaagatcaccgaggtcaatcagttcgttcaggac
cttttgggggtcaacgccagtcagttccgccagctgatcatcctgccccagggcgaggtg
caacgctttttaatggcggattccaagaccaaagaagagatcctcaccaccctctttcaa
acccagctctacaccaactgggtcacgaagctggatgagcgcgccaaaagcatgcgtgat
caaacccaagacctcaccagtcagctcaaggtcctgatgggccaagttgacggggttagc
ggccagctagagctcgaccagtggcaagtggcggtcggggacctgctgaccgaaaaaaag
gcggagctaagggcggttaccgaacaagtaaccacggcacaaaaagcggccgaccagttg
caagcccagttgaccgcggaacggcgcttggccgaggaccacgctgcgttagtttcctgt
gaaacgcaacaagtggagcttaaagaacgggcgccgcaaattaaacgcttggccgacgaa
aacgaagaaacggcgtgggcccaacaacaccaaacggcataccacgagtggcaagccggg
acgaccaaattggcggaactgaccaagcagcaagcggcgtgtgaacaaaaacaagccgcg
gttaaggtgcgggtgcaagaattgacccaagtggccgaacggttaaaggaacaagaaccg
gccgtccaagaacgccaacgccaagtggccaacattcgagagaagctccccctctttgaa
gaggtggccgccctaagtaagcggctggaaaaagagcgccgggcccaagttgaacaagaa
cggacggttagtgaccaaacgagcgccctgactaagttacaggccgagttagaccgggtg
gatcaggaactccaagccgctcccgacctgacccaagcggcggttacgattgccaccagg
gtccaacaagtagtccgctggcaacaggcagtgaccgccctcggggagcaagccaaggag
ctggccaaccaggagcaagccctacgtgacctaaacgctcagcttgccgaggctaaaaaa
accgcccaagccgctcaagcggaccttaaagaaaagaagaaggcccgcctcgccgccatg
attgcaaccctggctagcgagctggaggaaggggaggcctgcccgatttgcgggagtacc
acccacccccacgtcgccacggcggtgcaaacgggccaggaagtaaccgaggcaacgcta
gatgcggcccaggcgaaagtgaccaaggcggaaacgaccctggcgactttaaccacgcgg
caagcgaaccaagacagccagctagaaaagggacgggcaactttccaagacgaattggca
acgctttgccaagccgtggcaagcccagcgggtgacctggaggcagccacggcggccgtg
gccgaagccgtcgcggcgctggaccacgaccgccaggaattgcaaaacgcccaagctaag
gaaacggaaaaccagcaacgccaggtaagcctgaccaagcagatccaggcggggcaagca
aagtaccaggaactgcaagcagcggtcaatgaagggcgcctgaacgtcaaccaaacccaa
accgagttagttaacaagcagggccagttgcccgccgaactgccggacctggcgagtgcc
gagcggtggctaaaggaagaggaacaggcgttagcggactttgccagccagcaaacgcaa
aaccaggacgcccttagtcgggcccaaacccaattaacccaactgaccaccacgagccag
cagctagcggacagcgccaaagcgaccgcagccgaagtggaccaacgcaagcgggaacta
acggcggccctagcagaacgccaagcagcgtgggaggtctttgaacgggccctggcccgc
gttccggaactggcggcccgccaaagggaggtcaacgactaccgtcaacggctggcgagc
ctggccgaccggcgccaacggttggtagaacaaatcgccggccggcctaagccggacgtg
gaaaagacggcggggcagttgaagaaagcccaggtgaagttggaccagctcaaaggggcg
gtgattgaacaaggcaacgccctgacgcggatcaaggaaattaaacaacaagtcgaaaaa
aaggcggctaagcagggcgacaccgagcgccaactgcgggaactttccagcctgtgcgcc
ctactgaaggggcagggcgggacccagttaggcttgcagcggtatgtccaacgccactac
tttaccgaggtcttggcggtcgctaaccagtggctagctaagttaacccacggtcgctac
caaatgcacctggatggggaagccgactttaaggggcggcagaacaaaaacgggttggaa
atttacgccgacgatgactacgccggcaaagcgcgcaaggtgcaaagcctgtcggggggt
gagagcttcttgaccgccctggcgctggcgttggccctcggggaagtcgttcagcgccac
catgggggcgttgaaatcgaagccctcttcgttgacgaagggttcggctccctagatcaa
gacgccctgggtgaagccctggataccttgcaaagcctggacggcaaccgaatgattggg
atcatcagccacgtgaccgagctggaggagcagatccccgatcagttacaggtgatcgcg
gagaatgggcgcagcaaggttaaatatcacctggcaacggactaa
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