Limosilactobacillus oris: AYI71_09240
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Entry
AYI71_09240 CDS
T04391
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lor
Limosilactobacillus oris
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_09240
Enzymes [BR:
lor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYI71_09240
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYI71_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMS08933
LinkDB
All DBs
Position
complement(1855439..1859452)
Genome browser
AA seq
1337 aa
AA seq
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MVFTPSKEQEPAINDRQKDILVSASAGSGKTAVLVERVIQLMETGLSKDAKPSERPNIDD
ILMVTFTTDAAKNMRDRIRRRLVGATDEHMKAQVARLALANISTIHSFCEQLIKRYYYVI
DLDPQFRLIDDAEQQLLKEQAWQETLDDWVANPDQVGALHQLIDNFGAGNLESVVQALDT
EADAQPHPSDWLAGLSGLYQFEEGADPRQSAFFKRLFEPLVGPQLKELRDQWAALGEVGP
ARFAEQVEEDLAKLATTVDDQGHLLGSWDSLAQTLNKKNFAPKLRKRKDDDDPELLDELG
VQRGGLRDQLGDLHDTYFFQSAADLVKYGQKAGALIEILTRVATDFRCHYQIIKQDRRLL
DFSDLEHYAYAILTGENINPKVAWSDEEARAKRQAAAQVQAELQRHYKEIMIDEYQDTNR
LQDDLLRLLHKSGQNHRFMVGDMKQSIYRFRQADPTLFKDYYDQFSADGQSSEALDLSDN
YRSRHEVTDLVNLIFEQLMDQQLGEMVYDDKASLKPKADWGTDRDQASPATPELLLFDGG
VKKTTANPTGEDAIVVRQPEDKVASEVWLIGQRIRELLAKETILDPETKRVRPITPGDIA
ILSRAKRIHSVIAEQFAKLNLPVMVHGVENYFKATEIRVVMSLLKVIDNPYQDVPLAAVL
RSPLIQVAPEVAAKFGLSQGENRIGFTEPELAYLKVNSTSKDFFGVVQQNYYAWRDQEVE
AVENHDALTEEELAERVAGDPAGLATKEELGVNCGLIYLKLARFFELRDHLRRVAQRRPL
VDLIWTIYQATGYLDYVGGMSGGPQRQANLHALYERASGYEESGFKGLYQFIHFIEQMQK
KNDDLGEATTALAGDAINVMTIHKSKGLQFPIVFLVETTHQFQVDRDPVTIEPQAGIGFT
YVDSTANETMRVKHPLVQQAALKEKKKRQDRAEEMRLLYVALTRAEQRLFITGYVKDADL
TKKMDKWNRAFDSASPLLTTTTRLKGQSMLDWIMMTLVRTANFPTLREGIEAAASPLRGL
TKAAYQIKLQNADQVQVALNTPLDLHPNATAEQATPAAATSRQFKADLERVLNFTYPDQV
ATQTTAFQAVSTVREAFAHQDPTNLEMGRLEIDRDQIKEAGAYLAPEERAFESPAFITGA
SDQEPTGTAIGTATHLVFQKLPLTEPLDEGAVRALIKSLTESGLIDNPQVAAGIDVAGVV
SFYQTGLGQVITAHPKQVHREVPFSMLLSAHELFSGIGATDDSEVLIHGIIDGYVQHDDQ
IDMFDYKTDRISQAHPEEDLQELADKYSGQLVLYADALTKMTGVPLEKIHRHLYFTRAKR
VVTLSAPPSSHEPKEEA
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggttttcacaccaagtaaggaacaggagccggcgatcaacgaccggcaaaaagacatt
ttggtttccgcctcggcggggagtgggaagaccgccgttttggttgagcgggtgatccag
ctgatggaaaccggactgagtaaggacgctaagcctagcgagcggcccaacatcgatgac
atcctaatggtgacctttaccaccgacgccgctaagaacatgcgcgaccggatccgccgg
cgcctggtcggggcgaccgacgaacacatgaaggcccaggtggcccgcttggccctggcc
aacatcagcacgatccactccttttgcgagcagttgattaagcgctactactacgttatc
gacctcgacccccagtttcggttaattgacgatgccgaacagcagctcctaaaggaacag
gcctggcaagagaccctcgatgactgggtggccaacccggaccaagtaggggcgctgcac
cagttaatcgataactttggggcggggaacctcgagtccgtcgttcaggcgctggacacc
gaggccgacgcccagccgcacccgagcgactggctggccggcttaagtggcctttaccag
ttcgaagaaggggcggacccgcggcaaagtgccttctttaagcgcctctttgaacccctc
gtgggcccgcaactaaaggaactgcgggaccagtgggcggcccttggcgaagtggggccg
gcccgttttgccgagcaggttgaagaagatttggctaaattagccacgaccgttgatgac
cagggccatttgttaggcagctgggacagcctggcccagaccctcaacaagaagaatttt
gcgcctaagttgcgcaaacgtaaggatgacgacgatcccgaactcttagacgaactggga
gttcagcggggtggcctgcgggatcagctgggcgacctccacgatacctacttcttccag
tccgctgcggacctggttaagtatggtcaaaaggctggcgccctaattgagatcttaacc
cgggtggccaccgacttccggtgccactaccagatcatcaagcaggaccgccgcctgctc
gatttctccgacttagagcactacgcctacgctatcttgaccggcgaaaacatcaaccca
aaggtggcctggagtgacgaagaagcgcgggccaagcgccaagccgccgcccaggtccaa
gccgagttgcagcgccactacaaggaaatcatgatcgacgagtaccaagacaccaaccgc
ctgcaagacgacctgttacgcctcttacacaagagtgggcaaaaccaccgctttatggtt
ggggacatgaagcagtcgatctaccgcttccgccaggccgaccccaccctgtttaaggac
tactacgatcagttcagcgcggatgggcaaagcagcgaggccctggacctgagcgacaat
taccgctcccgccacgaggttaccgacctggtcaacctcattttcgaacagctgatggac
cagcaattaggtgagatggtctacgatgacaaggccagcttgaagcccaaggccgattgg
gggaccgaccgggaccaggctagcccggcgaccccggaactcctgctctttgatgggggc
gtcaagaaaacgaccgctaaccccaccggcgaggacgccatcgtggtccgccagccggaa
gacaaggtcgctagcgaagtctggctgattggtcaacggatccgcgagctcctggccaag
gaaacgatcttagacccggaaaccaagcgggtccgtccgatcacgccgggcgacatcgcc
attttgtcgcgggccaagcggattcactcggtgatcgccgaacagtttgccaagcttaac
ttaccggtgatggtgcacggggtggaaaactactttaaggccaccgagatccgggtcgtg
atgtccttgctaaaggtaatcgataacccctaccaagacgttccgttggcggccgtactc
cgttcgccgctgattcaagttgcccccgaggtggcggctaagttcggcctgagccagggc
gaaaaccggatcggctttacggaaccggagttagcctacttgaaggtcaacagcacctcc
aaggacttctttggcgtcgtgcagcaaaactactacgcttggcgcgatcaagaggtcgaa
gcggttgaaaaccatgacgccctgactgaagaggaactcgccgaacgggtcgcaggcgac
ccggccggcttagcgaccaaggaagaactgggcgtcaactgtgggttaatctacctgaag
ttagcccgcttctttgagttgcgggaccacttgcgccgggtcgcccagcgccgccccttg
gtggacctgatctggacgatttaccaagcaaccggctacttagattacgtcggtggaatg
agtggggggcctcagcgccaggccaacctccacgccctgtacgagcgggccagtggttac
gaggagagtggcttcaaggggctctaccagttcatccacttcatcgagcagatgcaaaag
aaaaacgacgacttgggcgaggcgaccacggccctggccggcgacgccatcaacgtcatg
acgatccacaagtccaaggggctccagttcccgatcgtcttcttagtggaaacgacccac
cagttccaagtcgaccgggatccggtaacgattgagccccaggccgggattggcttcacc
tacgtggatagcacggccaacgagacgatgcgcgtcaagcacccgctggtccaacaggcg
gccttaaaggagaaaaagaagcgccaggaccgggccgaagaaatgcgcctcctctacgtg
gccctgacccgggccgagcagcgcctcttcatcaccgggtacgtgaaggacgctgacctg
accaagaagatggataagtggaaccgggcctttgatagcgccagcccgctgttgaccacc
accacccgcttgaaggggcaatcgatgcttgattggatcatgatgaccctggtgcggacg
gcgaacttcccaacgctaagggaggggattgaagccgccgctagcccgctgcggggcctt
accaaggcggcctaccaaattaagctgcaaaacgccgaccaggtccaggtggcccttaac
accccgctggacctgcacccgaatgcaacggcggagcaagccaccccggcggccgccact
agccgccagtttaaggccgacttagaacgggtgttaaactttacctacccggatcaagtg
gcgacccaaacgaccgcctttcaagccgtttcgacggtgcgggaggcctttgcccaccag
gaccctaccaacctggagatggggcggttagaaattgaccgcgaccagatcaaagaagcc
ggggcctacctagcaccggaagagcgggccttcgaaagtcccgccttcatcaccggggcg
agcgatcaggagccaaccgggacggcgatcgggaccgctacccacttggtcttccagaaa
ctaccgttaacggaaccgcttgacgaaggggcggtccgtgctttaattaagtccctaacg
gagagtggtttaatcgacaatccccaagttgcggcgggcattgacgtggccggcgtggta
tccttttaccaaacggggctcggtcaggtcattaccgcccaccctaagcaggttcaccgg
gaagtaccgttctcgatgttactgagcgcccacgagctcttcagcgggattggggccacc
gatgacagtgaggtgttgatccacgggatcatcgacggctacgtccaacacgacgaccag
atcgacatgttcgattacaagaccgaccggatcagtcaggcccacccggaagaagacctc
caggaactggcggacaagtactcgggccaactggtgctgtacgccgatgccctgaccaag
atgacgggggttcccctagaaaagatccaccgccacctttacttcacccgggccaagcgg
gtggtaaccctgagcgccccgccgtcgtcgcacgaaccaaaggaggaagcataa
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