Limosilactobacillus oris: AYI71_09245
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Entry
AYI71_09245 CDS
T04391
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lor
Limosilactobacillus oris
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_09245
Enzymes [BR:
lor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYI71_09245
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYI71_09245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DRE2_N
Motif
Other DBs
NCBI-ProteinID:
AMS08934
LinkDB
All DBs
Position
complement(1859459..1863193)
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AA seq
1244 aa
AA seq
DB search
MATLQFVLGSASFDHQQVMLDRLAAQYQQAPNDTYLYLVPNHVKFTTEVAVLKGLKKRLK
QTGNYAQANVAVLSFSRLGWFLCKDDPDYQKPRLSNVGMAMVVAKIIRELKAESPDLLKM
FRGESERQGFATAVTKQLVELQNANIQPADLAPEQETGIIKRALASQAGGGRASQSTVFT
DKMTVLYEIYRRFEAAVTTHVTAPDRSAMLLNHLEAADLSTTHVYLDRFGEFSAQEQLIV
DALIQRAADTTVSLILDRDYRGRELPSQNNLYYRSAKQYQDLLNLATQQVGVDVLAPIVL
NQPNQRRVSDALVGVEEWMEADARFALPDRLPAPTDQVGFFTAPTRVAELNRVATKIRQL
VATGQYRYRDFLVVTRHLDGYQTMLEPIFSRHQIPVFNDNQRPMATSPLATFTAALFKVL
KDYYQEADVMELLKTGLLVPETPEELQQEGRAKRNPNTFMTAVYRTENYCLKFGKGGRSW
FDERPWRLEGEQPESDALKRQNAQINWVKNYIKDELAPALADLQTATTGRELATKFYQFL
LDQGVRHQLYSWAHQAQESGQLTQLRDVQQIWQTFGTLLDEYVTILGDQVAPTEQPGQLV
AEFADLMNAGFNAGRYAQIPSTLDQVLVSESGMIQDNQRKVLFIMGATDDVMPEVKASEG
LLSDPDRELLKRGLNDDQFLPISGTDQINNEPFLNYLSMLSVTERLYMSAPLMSSDDSEL
TLSPYLKGLARHFNQWDDQNNAPTTDLPDRPNPRASEDDVWSFVAAPAVTMGNLIEVERL
SKDTGRKLTSAWRDVARALTRHDEGLTGRLNDIRDGQYAKNEAVPLQPELAARLYTTNRQ
GQVTNQLTASISQLEKFYQNPYDYFLRYGLHLKKRDELEVSSDKSGTLNHDALAFFVQSV
IDEPDLQLADLVKEEHQGRQAELIDQAFEQAMNQQEELRELAANNSQVNLQLQVAKQLIT
TMAKALCLQATQTDAQPVAVEKAFGQADWTGESQAAELPALTFDLTGAGLGEGAKVSLRG
RIDRLDELKLGEQTYQLVVDYKSYNKAFDLVDAYAGQALQMLAYLNALQAANPGEQLLGS
LYLRLYVPTVDAGKEGTAEELKEHLYQGITINDDAVLAALDHGLGEKGATLLSIKKKSKK
DTSRFKVSADEQFSAKAGSNLVSPTDLKRLMDHNAELIKEAAVQILQGQNEIRPYRRQVG
TTAETGLAFSDFLDVSRFDQALDDYKEIELTDADVEAKFEQEEE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttacaatttgttttggggagtgcgtcctttgaccaccagcaagtgatgctc
gatcgcttggcggctcagtaccagcaagcacctaatgatacctacctttacttagtgccc
aaccacgttaagttcaccaccgaagtggccgttttaaaggggcttaaaaagcggttgaag
caaaccggtaattacgcccaggctaacgtggcggtcctgtccttttcgcgcttggggtgg
tttttgtgtaaggacgaccccgattaccaaaagccccgcctttccaacgtggggatggcg
atggtggtcgccaaaatcattcgggaactcaaggcagaatcccccgaccttttgaagatg
tttcggggcgaaagcgaacgccagggctttgccacggcggtgactaagcaactggtcgaa
ctgcaaaacgccaatattcaaccggccgacctggcgcccgagcaggaaaccgggattatt
aagcgggccctggctagtcaggcggggggtggccgggccagtcaatcgacggtctttacc
gacaagatgaccgtcctgtacgaaatttaccggcgctttgaggcggcggtcacgacccac
gtcacggcgccggaccggtcagcgatgctcttaaaccaccttgaagccgccgacctatca
acgacccacgtttaccttgatcgctttggtgagtttagtgcccaggaacagttgattgtc
gacgccctgattcaacgggctgccgacaccacggtttctttgatcctcgaccgggattac
cggggacgggagttgcctagtcaaaacaacctctattaccgctcggccaagcagtaccaa
gacctgttgaacctcgccactcagcaggtgggcgtggatgtgttagcaccgattgttttg
aatcagccgaaccaacgacgggttagcgacgccttggtgggggtcgaagagtggatggaa
gcagacgcccgcttcgctctgccagacaggctgccggccccgaccgaccaagtgggcttt
ttcaccgccccaactcgggtggccgaactcaaccgggtcgccactaagattcgccagctc
gtcgccaccggtcagtaccgctaccgggactttttagtggttacgaggcacctggacggc
taccaaacgatgctagaaccgatctttagccgccaccaaattccggtcttcaacgataac
cagcgcccaatggcgacctcgccgctagcgaccttcaccgccgccttgttcaaggtctta
aaggactactaccaagaagccgacgtgatggagttgttaaagaccggcctcttggttccc
gagacgccggaagagctccaacaggaggggcgtgcgaagcgaaaccccaacaccttcatg
accgccgtctaccggaccgaaaactactgcctgaagttcggcaagggggggcggtcatgg
tttgacgagcggccgtggcgactggaaggagaacaaccagaaagcgatgcgctcaagcgc
caaaacgcccagattaactgggtcaaaaattacatcaaagatgaattggccccggccctg
gccgacctacaaacggccactaccgggcgggagttagccaccaagttctaccagttcctc
ttggatcaaggggtccgtcaccaactttattcctgggcccaccaagcccaagaaagcggg
cagttaacccagctgcgcgacgttcagcaaatttggcagacctttggcaccctcttggat
gagtacgtaaccatccttggcgaccaggtggccccgaccgagcagccggggcagttggtg
gccgagtttgccgacctcatgaacgccggttttaacgccgggcgttacgcccaaatcccg
tcgactttggatcaagtgttggtttcggaaagcgggatgatccaggacaaccagcgcaag
gtcctcttcatcatgggggcgaccgatgacgtgatgccggaagtcaaggccagcgagggg
ctcttatccgaccccgaccgggagcttttgaagcggggcttaaacgacgaccagttccta
cccatcagcgggaccgaccagatcaacaacgagcccttcttaaactacctgagcatgctg
tcggtaaccgagcgcctctacatgagcgcccccctgatgagcagcgacgacagtgagtta
accctctccccgtacctgaagggcttggcccgtcacttcaaccagtgggatgaccaaaac
aacgccccgaccaccgacttgccagaccggccgaacccgcgggcaagcgaagacgacgtg
tggtcctttgtggcggcgccggccgtgacgatggggaacctgattgaagtggagcgcctg
agtaaggacaccggccgtaagctgactagtgcctggcgggacgtggctagggccctaacc
cgccacgacgagggtttgacggggcggttaaacgacatccgggatggccagtacgccaaa
aacgaggcggtgccactgcaaccggaactggcggcccgcttgtacaccactaaccgccag
ggccaagtcaccaaccagttgacggcttcgattagccagctggagaagttctaccaaaac
ccgtacgactacttcttgcgttacggtttgcacctgaagaagcgcgacgaattagaggtc
tccagcgacaagtccgggaccttaaaccacgacgccctggccttctttgtccaaagcgtg
atcgacgaaccggacctgcagctggccgacttggttaaagaagagcaccaagggcgccaa
gccgagttgattgaccaagcctttgagcaggccatgaaccaacaagaggagttgcgggaa
ttggcggccaataacagccaggtcaacttgcaactgcaggtggccaagcagttgattacc
accatggccaaggccctgtgcctgcaagcaacccagaccgatgcccaaccggtggcggtc
gaaaaggcctttgggcaggcggattggaccggggaaagccaagccgccgagttaccagcg
ttaacctttgatctgaccggggcggggctcggtgagggcgccaaggtcagcctgcggggg
cggattgaccgcttagacgagttgaaactgggcgagcaaacctaccagctggtggttgat
tacaagtcctacaacaaggcgtttgacttggtcgacgcctacgccggccaggccctgcaa
atgctggcctacctcaacgcgttacaggcggccaacccgggcgagcaactactggggagc
ctgtacctgcgtttgtacgtcccgaccgttgacgccggcaaggaggggaccgccgaggag
ctaaaagagcacctctaccaggggatcacgattaacgatgacgccgtcttggccgccctc
gatcacgggcttggtgaaaagggcgccaccctgttaagcatcaaaaagaagagtaaaaaa
gacaccagccgctttaaggttagtgccgacgagcaattcagcgctaaggcgggctccaac
ctggtctcaccaaccgatttgaagcgcctgatggaccacaacgccgaactgattaaggaa
gccgccgttcagatcctgcagggtcaaaacgagattaggccgtaccggcgtcaagtcggc
accaccgcggagaccggcctggcctttagcgacttcttagacgtttcccgcttcgatcag
gccctagatgactacaaggaaatcgagctgaccgacgccgacgtggaagcaaagtttgaa
caagaggaggaatag
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