Limosilactobacillus oris: AYI71_12675
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Entry
AYI71_12675 CDS
T04391
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lor
Limosilactobacillus oris
Pathway
lor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYI71_12675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_12675
Enzymes [BR:
lor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYI71_12675
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYI71_12675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
PIF1
AAA_19
nSTAND_NTPase5
AAA_11
Cas3-like_C_2
DAP3
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AMS09520
LinkDB
All DBs
Position
2544569..2546986
Genome browser
AA seq
805 aa
AA seq
DB search
MAELVQVIVDVPTMQTNRPYTYRVPERLERQVQPGMRVMVPFGRGSREVQGFVVAVDQPG
TFDGDLKDLAGVMDLSPVLNDELLKLAGWLADQTYAFKITAFYTMLPSLLKAQTTRLVRL
VDEVDEQTRLALFADQDELDLAKVQTDPLALSQLMRLRRAGKVVIDYRVHDRARAKQITT
ITPTLSFDDYEGERLGVLKNAHAQRNLLDYLQSLAGKTVPLKQAQEESGLSAATFTTGAK
RGWLKKGQAEVYRDPSGALPTSPTAPPTLNQEQAQAVKRINQATDQRTAETFLLQGVTGS
GKTEVYLRAIERALANGRSALMLVPEISLTPQIVSRVRGRFGKQVAVLHSGLSNGEHYDE
WRRIKRGEAKVVVGARSAVFAPLDNVGLIIMDEEHESSYKQDDAPRYHARDVAKWRAAYH
HAPLVLGSATPSLESRARAATGLYHRLTLLHRVNQRPLPPIQVVDMKREVQARGETNYSL
PLLNLLTDRLNKGQQSILMLNRRGFSSFVMCRDCGYVPKCPNCDISLTLHMDSRSLKCHY
CGHEERIPNTCLNCQGHRIRYYGTGTEKAVAELQTYLPTARIIRMDVDTTRRKGMHEKLL
TKFGNHEADILLGTQMIAKGLDFPGVTLVGVLNADTGLDLPDFRSSERTFDLLAQVAGRA
GRADEAGQVVIQTFNPDNYVIQLARAHDYERFFVQEMNLRKLGAYPPYYYTVRVMGSHPD
EQIAARVMQAVRQELVGQLDSQTIILGPTPRAIARLKNRYYYQIVIKYRHDPALHARLTA
IMEGAQQQFDRETQVMIDPDPQYFL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgttcaagtcatagttgatgttccaacgatgcagaccaaccgcccttac
acctaccgggtgcccgaacgcctcgagcgtcaagtgcaaccggggatgcgggtgatggtc
ccctttgggcggggaagccgggaggtccaggggttcgtggtcgccgttgaccaaccaggt
acatttgacggtgacttaaaggacctcgctggggtgatggacctaagcccggtcttaaat
gacgagctactgaaactagcgggttggttggccgatcaaacctacgcctttaaaatcacg
gccttttataccatgttaccaagcctcttaaaggcccagacgacacggttggttcgcttg
gtcgatgaagttgatgagcaaacgaggctcgccctgtttgccgaccaggatgaattagac
cttgccaaagttcaaactgaccccttggcactgagtcagttgatgaggctacggcgagcg
ggtaaggtggtaattgactatcgggttcacgaccgggcccgggctaaacaaatcaccacc
attaccccaacgctgtcctttgatgattacgaaggggagcgactaggggtgttaaaaaac
gcccacgcccagcggaatctattggattacttgcaaagcttagcggggaaaaccgtgcca
ctcaagcaagcccaagaagagagtggcctttcggcggccacctttacaaccggggctaag
cgggggtggctcaaaaaggggcaagcagaagtttaccgcgatcccagtggggcgctgcct
acgtcaccaactgccccgccgaccctaaatcaggagcaggcccaggcggtgaaaaggatt
aaccaggccaccgatcaacgaaccgccgaaactttcctgttgcagggggtgacgggttcg
gggaaaacggaggtttacctgcgggcaattgaacgggccttagctaacgggcgcagcgcc
ctgatgttggtgccagaaatttcactaaccccgcaaatcgtcagccgggtgcggggccgc
tttggtaaacaagtcgcggtcctgcattcgggcctttccaacggggaacactatgacgaa
tggcgccgaatcaagcgtggcgaggcgaaagtggtggtgggggcgcgctcagcggtattt
gcccccctggacaacgttggtttgatcattatggacgaggagcacgagtcgtcttacaag
caagacgacgccccacgttaccacgcccgcgacgttgctaagtggcgagctgcttaccat
cacgccccgctcgtcttgggatcggcaaccccgagcctagaaagccgggccagggcggcg
accgggttataccaccgcttaaccttgctccaccgggttaaccaacgccccctgccgccg
atccaagtggtcgatatgaaaagagaggttcaagcgcggggggagactaattattcgttg
ccgctcttgaacttgttgaccgaccggcttaataaggggcaacaaagcatcctaatgctt
aaccggcggggcttttcctcctttgtgatgtgtagggactgcggttacgttcctaagtgt
cccaactgcgatatctcgttgaccctgcacatggatagccggagcctaaagtgtcactat
tgcggtcacgaggagcggatccccaacacctgtctgaactgccagggccaccgaatccgc
tactacgggaccggtaccgaaaaggcggtagccgaattgcaaacctacctgccgaccgct
cggatcatccggatggacgttgatactacccgccgcaaggggatgcacgagaaattacta
accaagtttggtaaccacgaggccgacatcctattggggacccaaatgatcgccaagggg
ttagatttcccgggggtgaccctggtgggggtcttaaacgccgacacggggctggattta
cccgatttccggtcctctgagcgcacctttgacctcctagcgcaggtggccgggcgggcc
ggccgggccgatgaggccggccaagtggtgattcaaaccttcaacccggataattacgtg
atccaactggcgcgggcccacgattacgagcgcttcttcgtccaggagatgaacctgcgc
aaactcggcgcctacccgccgtattattacacggtccgggtgatgggcagccaccccgat
gagcagatagccgcccgggtgatgcaagcggttcgccaggagttggtggggcagttggat
tcgcaaacgatcattttaggccccaccccccgggcaattgcccgcttgaaaaaccgttac
tattaccaaattgtgatcaagtaccgtcacgatccggccctccatgcccgcttaaccgcg
atcatggaaggggcccagcaacagtttgaccgggagacccaggtgatgattgatccggat
ccccagtacttcttgtag
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