Leptotrichia sp. oral taxon 847: AXF11_01890
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Entry
AXF11_01890 CDS
T04653
Name
(GenBank) pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lot
Leptotrichia sp. oral taxon 847
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lot03016
]
AXF11_01890
Enzymes [BR:
lot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AXF11_01890
Transfer RNA biogenesis [BR:
lot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXF11_01890
Prokaryotic type
AXF11_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
KH_2
KH_KhpA-B
KH_1
KH_NusA_2nd
DUF6290
Motif
Other DBs
NCBI-ProteinID:
AMD94467
LinkDB
All DBs
Position
451869..452789
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AA seq
306 aa
AA seq
DB search
MDLKKENLENKNYKDLRKFENTKYFGYLFFVKYDGKKFDSFDENPNKRSVKLEFKNLLLK
NGIKNFSSVQQAGRTDAFVSAKENVLYLNLKKILDFSQLKIKKVNGLEIKEIKKTVPFLE
FPEMVKKRHYIYEYPEKLIKNYDKKIELICEKVSGKKDFSEFTNKKGKQLKEKIREIFVS
YKNKKLYFSGNKFLPQQVRIMSNFILNDKKSTLSGKYLTLEKVEFSDEMKRLIFEKVEKF
EDLFCKKNYFDKNEFEELEKIQKIEKNAYFTVLFVKNKDKGQFIGKKGKNIKKLKKMIGN
VVVKEL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaaagaaaatttagaaaataaaaattataaagatttgagaaaatttgaa
aatacaaaatattttggatatttattttttgtcaaatatgatggaaaaaaatttgattct
tttgacgaaaatccgaataaaagaagcgtaaaactggaatttaaaaatcttcttttaaaa
aatggaattaaaaatttttcttcagttcaacaggctggaagaacagatgcttttgttagt
gcaaaagaaaatgttttgtatttgaatcttaaaaaaattttggatttttcacaattaaaa
ataaaaaaagtgaatggacttgaaataaaagaaataaaaaagacagttccatttttagaa
tttcctgaaatggttaaaaaaaggcactatatttatgaatatccagaaaaacttattaaa
aattacgacaaaaaaattgaattgatttgtgagaaagtttctggaaaaaaagatttttca
gaatttacaaataaaaaagggaaacaattaaaagaaaaaataagagaaatttttgtttcg
tacaaaaataaaaaattatatttttctggaaataaatttttgccacagcaggtgagaatt
atgagcaattttattttgaacgataaaaaaagtactctttctggaaaatatctgacactt
gaaaaagttgaattttcagatgagatgaaaagactgatttttgaaaaagttgaaaagttt
gaagatttattttgtaaaaaaaattattttgataaaaacgaatttgaagaacttgaaaaa
attcaaaaaattgaaaaaaatgcttattttacagtgctttttgtaaaaaataaagacaaa
gggcaatttattggaaaaaaggggaaaaatataaaaaaactcaaaaaaatgattggaaat
gttgttgtaaaagagttgtga
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