Leptotrichia sp. oral taxon 847: AXF11_03275
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Entry
AXF11_03275 CDS
T04653
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03030
DNA replication
lot03430
Mismatch repair
lot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXF11_03275 (polC)
03430 Mismatch repair
AXF11_03275 (polC)
03440 Homologous recombination
AXF11_03275 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lot03032
]
AXF11_03275 (polC)
03400 DNA repair and recombination proteins [BR:
lot03400
]
AXF11_03275 (polC)
Enzymes [BR:
lot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXF11_03275 (polC)
DNA replication proteins [BR:
lot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXF11_03275 (polC)
DNA repair and recombination proteins [BR:
lot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXF11_03275 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
HHH_3
RNase_H_2
DNA_pol_A_exo1
tRNA_anti-codon
Rv2179c-like
DEDDh_C
T2SSK
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AMD94705
UniProt:
A0A0X8JTN6
LinkDB
All DBs
Position
complement(725285..729784)
Genome browser
AA seq
1499 aa
AA seq
DB search
MDSSVKEEKYRKIKPSNGFLQKYNMKSFEIKFISLFALEKKSIVSIVINDYSAAIEEISR
LKSLIRKKDKNTRIEVKFDVNDELILNDVKGFITFVIEYKKTEKNKYVMYLTNYEIEILE
DIIYLEVSSLEAAKEMQKEKLFRNLGKRISKVLKKDLKIEIVGKNSQNNEGSNRQSKNVL
VEEILPENIKKIETNEKSTFSSGENNFKKSEFRKNRTKIKNPVKIQISDLEDLEIENRAV
EIEGKIFKVDVRETKNKTLMYDFLVTDYNDSIGCRIFLNPKDEAQVAILKVDDWVKVVGY
YEEYNGEKYIRVQDLEAIESKDEKKEDNASKKRVELHAHTNMSEMSGVMSIKDYAKRAKE
FGHSAIAVTDFGVVHSFPFAFKEADENFKIIYGVEAYVVDDEAQMITNPKDMGIEEETYV
VFDIETTGFDPFNDKIIEIGAVKMKGKKIIGEFSEFVNPKIPIPEEIVKLTSITDEMVKD
APDIKTILPKFLEFCGDSTVVAHNAKFDVGFIKQKSSDQNLEFSPSVVDTLPLARALLTK
EQRFGLANLTKYFGITLESHHRAIDDARATAEVFQKFFNMIITKGILTLKDINMNLQPNI
QNAEILNTMILVKNQKGLRDLYELISKSHIDYFGMRKPRIPKTLLKQMRENLLLASSATG
IYGNRGELINLYLRGETEEIEEKAKFYDYIEIHPPITYNELVEKNTSEIENLEVIKEMNK
YFYDLGKRLGKIVVATGDVHYLDKREAINRNVLLLGSGNLRKTKFVDGSRYEFFDRELYF
RTTEEMLEEFKYLGDEIANEIVVKNTNKIADMIDAGIRPVPEGFYPPKIKGAEELVRKMT
YDKLEELYGNDVDQVLKERLEKELNSIIGNGFSVLYLIAQILVKKSVRKGYLVGSRGSVG
SSIVAYLMGITEVNGLYPHYRCPKCKHTEFMNEEGDGVDYPDKNCPKCGTKYIKDGHAIP
FEVFMGFNGEKVPDIDLNFSGEYQGKIHKYTEWLFNSDALKNIENVEDIEKIIDFEDFEN
PENSEYPENSENVFRAGTISTLAEKNAFGYVKKYLEESEGTENIKERKAEVTRLAMGCEG
ARKTTGQHPGGMIVVPKDKSIYDFCPVQRPANDMNSTFKTTHFDYHVMDEQLVKLDILGH
DDPTTLRILQDLTGVDIYKIPLDDKRVMSLFSGTEALGVSPDDIGSPTGTSGIPEFGTSF
VKKMLVDTRPKTFAELVRISGLSHGTDVWLNNAQDYVRSGVATLSQIITVRDDIMNKLID
DGLDKSLAFKIMEFVRKGRPTKDPDKWKEYSALMKEKGVEQWYIDSCEKIKYMFPKGHAV
AYVMMAVRIAYFKVHYPVEFYTAFLNRKVGDFKMTAMFFEKKKSGTEEDSPSLKKIKNLR
KKLESNPNLNAKQKQELFLYEILIEMNYRNIELAKPNVLTSDAKLFTITEDKKIQLPLIA
VDGLGESVAEKIVSEREKDPFLSLEDLTKRTKLNKTVLKILEDYECVEGIQKENQGKLF
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggatagtagtgttaaagaagaaaaatatcgtaaaataaagccatctaatggattttta
caaaaatataatatgaaaagttttgaaataaaatttataagtctatttgcgcttgagaaa
aaatctattgtcagtattgtcataaatgattacagtgctgcgattgaagaaatttcaaga
ttgaaaagtttaattcgtaaaaaagataaaaatacaagaattgaagttaaatttgatgtg
aatgatgaacttattcttaatgatgtaaaaggatttattacttttgttattgaatacaaa
aaaacagagaaaaataaatatgtgatgtatttgacaaattatgaaattgaaattttggaa
gacataatttatttggaagtttcttcgttggaggctgcaaaggaaatgcagaaagaaaaa
ctttttagaaatttaggaaagagaatttctaaagtgttaaaaaaggatcttaaaatagaa
attgtggggaaaaattctcaaaataacgaaggtagcaatagacaaagcaaaaatgttctt
gtcgaagaaattttacctgaaaatataaaaaaaattgagacaaatgaaaaatcaactttt
tcaagtggagaaaataattttaaaaaaagtgaatttagaaaaaatcgaactaagataaaa
aatcctgtaaaaattcagatttcggatttggaagaccttgaaattgaaaaccgcgctgtt
gaaattgaaggaaaaatttttaaagttgatgttagagaaactaaaaataaaactttgatg
tatgactttttagtaactgactacaatgattccataggttgcagaatttttttgaatcca
aaggatgaagcgcaagttgcaatacttaaagtggatgactgggtaaaagtagtggggtat
tacgaagagtataatggtgaaaaatatataagagtacaagatttggaagcgattgaatcg
aaagacgaaaaaaaagaggacaatgcgtcgaaaaagagagttgagcttcacgctcacaca
aatatgagtgaaatgagcggagttatgtcaatcaaagattatgcaaaaagagcgaaagaa
tttggacatagtgctatcgctgttacggattttggagttgtacattcatttccgtttgca
tttaaagaagcggatgaaaattttaaaatcatctacggagtggaagcgtatgttgtagat
gatgaagctcaaatgattaccaatccaaaagatatgggaattgaagaagaaacatatgtc
gtattcgatattgaaactactggatttgatccatttaatgataagataatcgaaattggg
gcagtaaaaatgaaggggaaaaagattattggcgaattttctgaatttgtaaatcctaaa
attcctattcctgaagaaattgtaaaacttacttcaattactgatgaaatggtaaaagat
gctcctgacatcaaaacaattttgccaaaatttttagaattttgtggtgattccacagtt
gttgcacataatgccaaatttgacgtgggatttattaagcaaaaatcaagtgaccaaaat
ttagagttttctccaagcgtggttgacactcttccacttgcaagagcgcttcttaccaag
gaacaaaggtttggactggcaaatttgactaaatattttggaataacattagaatcacat
cacagagcgattgacgatgcaagagcaactgctgaagtttttcagaaattttttaatatg
attataacaaaaggaattctgacactaaaagatataaatatgaatcttcagccaaatatt
caaaatgctgaaatattgaatacgatgattttggtaaaaaatcaaaaaggattaagggat
ttatatgagttaatttccaaatcgcacattgactactttgggatgagaaaaccgcgaatt
ccaaaaacattattgaaacaaatgagggaaaatttacttcttgcaagttcagcaactggg
atatatggaaatagaggggaactcataaatctttatttgcgtggagaaacagaagaaatt
gaagaaaaagcaaaattttatgactatatagagatacacccaccaattacatataatgaa
ctggtagaaaaaaatacgagtgaaattgagaatttagaagtaataaaagaaatgaataaa
tatttttatgatttagggaaaagattgggaaaaatagttgttgctacaggagatgtacat
tatttggacaaaagagaagcaattaacagaaatgttttacttttgggaagtggaaattta
agaaaaactaaatttgtcgatggttcaagatacgaattttttgatagagaattatatttt
aggacaactgaagaaatgcttgaagaatttaaatatttgggcgatgaaattgctaatgaa
attgttgtcaaaaatacaaataaaattgctgatatgattgatgctggaataagaccggtt
cctgaaggattttatccaccgaagataaaaggggctgaagagttagtaagaaaaatgact
tatgataaattagaggagctttatggtaacgatgttgaccaagttttgaaagaaagactg
gagaaagagttaaattcgattattggaaatggcttttccgtactttatttaattgcacaa
atattggttaaaaaatcggtaagaaaaggatatttagttggttcccgtggttcagtcggt
tcgtccattgtcgcttaccttatgggaattactgaagtaaatggactttatccacactac
agatgtccaaaatgtaaacatactgaatttatgaatgaagaaggagacggagttgactat
cctgataaaaattgtccaaaatgtggtacgaaatatataaaagatggacatgcaatacca
tttgaagtgtttatgggatttaatggagaaaaagtaccagatattgatttaaatttttct
ggagagtatcaagggaaaattcacaaatatactgaatggttatttaattcggatgccctt
aaaaatattgaaaatgttgaagatattgaaaaaattatagattttgaagattttgagaat
cctgaaaattctgaatatcctgaaaattctgaaaacgtatttcgtgctgggacaatttcc
acattagctgaaaaaaatgcttttggttatgtaaaaaaatatttggaagagagtgaaggg
acggaaaatatcaaggagagaaaggctgaagtaacaagacttgcgatgggctgtgaagga
gctagaaaaactactggacaacatcccggtggaatgatagtagttccaaaagataagtca
atttacgatttttgtcccgtacaaagacctgcaaatgacatgaattcaactttcaaaacg
acacattttgactatcatgtgatggacgaacagttagtaaaattggatattttaggacat
gatgatccgactacgcttagaattttacaagatttgacaggagtggacatctataaaatt
cctcttgacgataaaagggttatgagcctttttagcggcactgaagcacttggggtaagt
ccagatgatataggttctccaactgggacttcaggaattccagaatttggtacatctttt
gtgaaaaaaatgctagttgacacaagaccaaagacatttgcggaattagttagaatttcg
ggactttcgcacggaacggatgtctggttaaataatgcacaagattatgtaagaagtgga
gttgcaacattgagccagattataacggtgagagatgacattatgaataaacttatcgac
gacggactcgataaatctttagcttttaaaattatggaatttgtgagaaaagggcgacct
acaaaagatcctgataaatggaaagagtactcagcattgatgaaagaaaaaggtgtcgag
cagtggtacatagattcttgtgaaaaaataaaatacatgtttccaaaaggacacgctgtg
gcgtatgttatgatggcggtgagaattgcatattttaaagttcattatcctgtggaattt
tatacagcttttttaaatagaaaagtcggagattttaaaatgactgcgatgttttttgaa
aagaaaaaatctggtacagaagaagattcaccttctctaaaaaaaataaaaaatttaaga
aagaagctggaatcaaatccaaatttaaatgcaaaacaaaagcaggaattatttttgtat
gaaattttaatagaaatgaattatcgtaacattgaacttgcaaagccaaatgttttgaca
tccgacgcaaagcttttcacgataacagaagataaaaaaattcagttgccgctcattgcg
gtggacggacttggcgaatctgtcgctgaaaaaattgtatcagagcgagaaaaagatcca
tttttgtctctggaagatttgacgaagagaacgaagttaaataaaaccgtattaaaaata
ctggaagattatgaatgcgtggaaggaatacaaaaagaaaatcaaggaaaattattttag
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