Leptotrichia sp. oral taxon 847: AXF11_03665
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Entry
AXF11_03665 CDS
T04653
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF11_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lot03021
]
AXF11_03665
03019 Messenger RNA biogenesis [BR:
lot03019
]
AXF11_03665
Transcription machinery [BR:
lot03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXF11_03665
Messenger RNA biogenesis [BR:
lot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF11_03665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMD96000
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All DBs
Position
complement(813493..814728)
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AA seq
411 aa
AA seq
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MIKEILSKNVTTLKKMAKEYKIEGFSGMAKSDLINAILIKKGEEEGKTYGFGKLDIMNGS
TYGFLRNTSVGPDVYVSISQIKRFYLRNEDIVFGELRIPIGTEKNYGILKVLLVNGDLPE
KSLERPFFDDLIPSYPDEKLNLGSGEVSSRIIDLISPIGKGQRGLIVAPPKAGKTVLLST
LANDIIKYNPEIDVWILLIDERPEEVTDIKENVKEAEVYSATFDEDPRIHTQVTENVLEM
AKREVERGKDILILMDSLTRLARSYNITIPSSGKLISGGIDPNALYYPKRFLGAARNIKN
GGSLTIIATALIETGSRMDEVIFEEFKGTGNMEIILSRALEQLRIFPAIDVLKSGTRREE
LLIPKKNLEKIWALRRELSGMSEVEGMKKLIELTKLYKNNDELLENLVLKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaattctttcaaaaaatgttacaactttgaaaaagatggcgaaagaatat
aaaattgaaggattttctggaatggccaaatctgacttgataaatgccattcttataaaa
aagggtgaagaagaaggaaaaacttacggatttggaaaacttgatattatgaacggttca
acttatggatttttgcgaaatacttctgttgggcctgatgtctatgtttcgatttcccaa
attaaaagattttatttgagaaatgaagatattgtgtttggagagcttagaataccgatt
ggaactgaaaaaaattacggaattttaaaagtgcttctggtaaacggtgatttgcctgaa
aaatcactggaacgaccattttttgacgacttaatcccgtcatatcctgatgaaaaatta
aatcttggatcaggtgaagtttcttcaagaataattgatttaatttctccaattggaaaa
ggacagagaggacttattgtagctcctccaaaagctggaaaaactgtgttactttcgaca
cttgcgaatgatattataaaatacaatcctgaaattgatgtttggattttattaattgac
gagcggccagaagaagttaccgatataaaagaaaatgtaaaagaagcagaagtttattcg
gctacatttgatgaagatcctagaatccatacgcaagttactgaaaatgtattagaaatg
gcaaaaagggaagttgagcgaggaaaagatattctaattttaatggatagcttgacaaga
cttgcaagatcttacaacatcacaattccatcgagtggaaaattaatctctggaggaatc
gatccaaatgcgctttattatccaaaaagatttttaggagctgccagaaatattaaaaat
ggtggaagtcttacaatcatcgcaacggcacttattgagacgggaagtagaatggacgaa
gttatttttgaagaattcaaaggtactggtaatatggaaataattttgagtagagctctt
gaacagcttagaattttcccagcgatagatgtgctaaaaagtggtacaagaagagaagag
ttattaattcctaaaaaaaatctggaaaaaatttgggctcttagaagagaacttagtgga
atgtcggaagttgaaggaatgaaaaaattgattgaacttacaaaattatataaaaataac
gatgaattacttgaaaatttggtattgaaaaaataa
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