Leptotrichia sp. oral taxon 847: AXF11_04460
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Entry
AXF11_04460 CDS
T04653
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03410
Base excision repair
lot03430
Mismatch repair
lot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXF11_04460
03430 Mismatch repair
AXF11_04460
03440 Homologous recombination
AXF11_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lot03400
]
AXF11_04460
DNA repair and recombination proteins [BR:
lot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AXF11_04460
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AXF11_04460
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AXF11_04460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMD94911
LinkDB
All DBs
Position
975048..977987
Genome browser
AA seq
979 aa
AA seq
DB search
MRNTRWRSKIIPSPRQEKEYIKKSGNDERKNSKKIKIKRANQNEAKKFSIDQDILQILYS
RGIDSEEKIKKFLNPNLKDIEDPLGLCDMEKAVIEIEKAILKQKNIWIYGDYDVDGITST
SVLYLALKELGAENVNYYIPIRDEGYGLNNEALKKIKDSGADLIITVDCGITAFSEVEFA
NSIDLPIIITDHHNLNGGRIPEALAVINPKRKENSFSFEFLAGVGTIFMVMISLFERAGK
KEDTNKYLDLVAIGTVADIVPLTDENRIFTKFGLEQLFHTRHKGLKFLLYKLFFSNQQNT
EKIEYTTYDVGFIIAPVFNAAGRLTDAKMVVKLLISDNDREIEVIVKELINRNFERKELQ
NKIVEKIENKIEKTDISNDFVIVDYSPEYHHGVIGIAASKIVDKYYKPVIIMEVKEDEGV
AVGSCRSIANFNILEALQSMPELFLKFGGHSGAAGFTLPIKNIPLFQKKVNKFAKTKLTK
NDFVKIIEIDKQIPIQKISYEFFQLTEKLKPFGFGNPTPTFRTNNVLFENIKFIGENRNH
IMLDLKQKGFSNKNAVWFNSGEYFKDLNKNLIYDIVFKLKTEMYQNRFYTKVYIEDVKPS
KMKDETLLYYHSLFNTSFPLKSIFYTNVDWEEDKKIKMKANFDQIELFCGRKIIGRLDYN
ISNMLLLLNKYYNWKFSVEIENIRKTENNKIVEILIKRNYKFKCYEYEDAGIFKKIKDFL
IGKMEYNTQTKTLLAQIFKHDKNLIIKNFFNKKEEFKYEMSDFKIFLLTIGIYYKKMTSK
KSQIVVKSRDDFDYNEPFINEYFEINEKYENDHPFTVFYDFVPKNISFSDKKKNNLETVS
AEDEIKDLKNENNKNFEINEELKKIKYNEIKQIEYKIEKDEDDKIKEKFCIILNDGEFLK
RLNFSEKEMERKNIAEISTDIKIKKNIIFLENLSKKDRKKLNPKNIYIKYLPFQEKIKLK
KLLNEGKIIYSDYSINDIL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatactagatggcgttcaaagattattcctagtccacgtcaggaaaaagaatac
ataaaaaaaagtggaaatgatgaaagaaaaaattcaaaaaaaataaaaattaaaagagca
aatcaaaatgaagcgaaaaaattttcgattgatcaagatattctacaaattctttattca
aggggaattgattcagaagaaaaaattaaaaaatttcttaatcccaatttaaaagatatt
gaggatcccttgggactttgcgatatggaaaaagctgtgattgaaattgaaaaagcgatt
ttgaagcagaaaaatatttggatatatggggattacgatgttgatggcatcacttccact
tcagttttgtatttggcgttaaaagaacttggagcggaaaatgttaattattatattccc
attcgagatgagggttatgggttaaataatgaagcgctaaaaaaaataaaagattcagga
gcggatttgataattacagttgactgcggaattaccgcgttttctgaagttgaatttgcc
aattcaatagatttgccaataataattaccgatcaccacaatctaaacggtggaagaatt
ccagaagctctggcagttattaatcccaaaagaaaggaaaatagtttttcttttgagttt
ttggctggagttggaactatttttatggttatgatttctctttttgaaagagctggaaaa
aaagaagataccaataaatatttagatttagtggcaattgggacggtcgcagatattgtt
cctcttacagatgaaaatagaatttttacaaaattcggattggaacaattatttcacaca
agacataaagggttaaaatttttactttataaattatttttttcaaatcagcaaaatact
gaaaaaattgaatacacaacttatgatgtaggatttataatagcacccgtatttaatgcg
gcaggtaggctcacagatgcaaaaatggttgtaaaacttttgatttcagataatgacaga
gaaattgaagtaatcgtaaaagagctcatcaatagaaactttgagagaaaagaactgcaa
aataaaattgtggaaaaaatagaaaataaaattgaaaaaaccgatatttcaaacgacttt
gtaattgtggattattcacctgaatatcatcacggtgtaattggaattgcagcttccaaa
attgtcgataaatactataagcctgtaataataatggaagtaaaagaagatgagggagtt
gcggtcggttcatgcagaagtattgcaaactttaatattttggaagcgcttcaatcaatg
ccagaattatttttgaaatttggaggacactcaggtgctgctggatttactcttccaata
aaaaatattccactatttcaaaaaaaagtaaataaatttgcaaaaactaaattgacaaaa
aacgattttgtgaaaattattgaaattgacaagcaaattccaatacaaaaaatttcgtac
gaattttttcaactgacagaaaagttaaaaccatttggatttggaaatcctacgccgact
ttcagaacaaataatgttctttttgaaaacattaaatttattggagaaaatagaaatcat
attatgcttgatcttaaacaaaagggattttctaataaaaatgcagtttggtttaattcg
ggagaatattttaaagatttaaacaaaaatttaatttatgacattgtttttaaattgaaa
actgaaatgtatcaaaacagattttatacaaaagtgtatattgaagatgtcaaaccatcc
aaaatgaaagacgaaactttgctctattaccattcattattcaacacttcattcccacta
aaatcaattttttatacgaatgttgactgggaagaagataaaaaaataaaaatgaaagca
aattttgatcaaatagaacttttttgtggaagaaaaattatagggcgactggattacaat
atctcaaatatgctcttactattaaataaatattataattggaaattttcggttgaaatt
gaaaacataagaaaaactgaaaacaacaaaatagttgaaattttgataaaaagaaattac
aaatttaagtgttatgagtacgaagatgcgggaatttttaaaaaaataaaagatttttta
attggaaaaatggaatataacactcagacaaagacattgctcgcacaaatttttaaacat
gataaaaacttaattataaaaaatttttttaataaaaaagaagaatttaaatatgaaatg
tcagatttcaaaatatttttgcttacaatcggaatttattacaagaaaatgacttccaaa
aaaagtcaaattgtagtaaaaagtagagatgattttgactacaacgagccttttatcaac
gaatattttgaaataaatgaaaaatatgaaaatgaccatccatttactgttttttatgat
ttcgttcctaaaaatattagtttttctgacaaaaagaaaaataatttggaaacagtttcc
gcagaagatgaaattaaagatttgaaaaatgaaaataacaaaaattttgaaataaatgaa
gaactaaaaaaaattaaatacaacgaaattaaacaaattgaatataaaattgaaaaagat
gaagatgacaaaattaaagaaaaattttgtataattttaaacgacggcgaatttttaaaa
aggctaaatttttcagaaaaagaaatggaaagaaaaaatattgcagaaatttcaacggat
attaaaatcaaaaaaaatattatttttcttgaaaatttatcaaaaaaagatagaaaaaaa
ttaaatcccaaaaatatttacataaaatatctgcctttccaggaaaaaatcaaattaaaa
aaattgcttaacgaaggaaaaattatttattctgactattcaataaatgatattttgtag
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