KEGG   Leptotrichia sp. oral taxon 847: AXF11_07925
Entry
AXF11_07925       CDS       T04653                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
lot  Leptotrichia sp. oral taxon 847
Brite
KEGG Orthology (KO) [BR:lot00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AXF11_07925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lot03021]
    AXF11_07925
Transcription machinery [BR:lot03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AXF11_07925
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 EhaM YaaT_C YmtS_Ross
Other DBs
NCBI-ProteinID: AMD95510
LinkDB
Position
1697056..1698234
AA seq 392 aa
MSENKNKLKNSLANFIKETRKQKVASYEEINSTLPADYPPEKIEQLIKKLTDDGVRIVNT
LKEKNELLKVPKTMEEIKKMEVSDFEDGNDEFVENEIDENEVDKLLQADLIKMAESMDVD
EPIKMYLREIGQIPLLSYEEEIEYAQKVLNGDEEAKQKLIESNLRLVVSIAKKHTNRGLK
MLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETI
NKIKKESRIILQETGKEPTAEELSKKLELPVEKVKNILEMNQDPISLETPVGSEEDSELG
DFVEDDKFANPYDATTRVLLKEQLDDVLKTLNEREEMVLRYRYGLDDGSQKTLEEVGKIF
NVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtctgaaaacaaaaataaattaaaaaacagtctcgcaaattttataaaagaaacaaga
aagcagaaagtagccagttatgaagaaattaattccactttaccagcggattatccacct
gaaaaaattgaacagttaataaaaaaactaactgacgatggtgtccgaatagttaatacg
ctaaaagaaaaaaatgagttgctaaaagttccaaaaactatggaagaaataaaaaaaatg
gaagtttctgactttgaagacggaaatgatgagtttgtggagaacgaaatagatgaaaat
gaagtggacaagttactacaggcagatttaattaaaatggctgaaagtatggatgtggac
gaaccaattaaaatgtatttacgtgaaattggacaaataccacttttaagttatgaagaa
gaaatagagtatgcacagaaagttttaaatggagatgaagaagcgaaacaaaaattaata
gaatctaatttgagattagtggtgagcatagccaaaaaacatactaatcgaggtctaaaa
atgctagatttaattcaagaggggaatatgggacttatgaaagctgttgaaaaatttgag
tatgaaaaaggattcaaattttcaacttacgcgacttggtggataagacaggcaataaca
agagcgattgctgaccaaggaagaacaataagaatacctgttcatatgatagaaacaatt
aataaaataaaaaaagaaagtagaattattttgcaggaaactggaaaagaaccgacagct
gaagaattgtcaaaaaagttggaattaccagttgaaaaagtaaaaaatatacttgagatg
aatcaggaccccatttctttggaaactcctgtaggaagtgaagaagatagtgaattaggt
gattttgtggaagatgacaaattcgcaaatccatatgatgcgacaaccagagtactttta
aaggaacagcttgacgatgttctaaaaacattaaatgaaagagaagagatggtacttaga
tatagatatggcttagatgatggttcgcaaaaaacattggaagaagtcgggaaaattttt
aatgtaacaagagagagaataagacaaattgaagtaaaagcattaagaaaattaagacat
ccaagcagaagaaaaaaattagaagattataggagctag

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