Leptotrichia sp. oral taxon 847: AXF11_07925
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Entry
AXF11_07925 CDS
T04653
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
lot
Leptotrichia sp. oral taxon 847
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXF11_07925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lot03021
]
AXF11_07925
Transcription machinery [BR:
lot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXF11_07925
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
EhaM
YaaT_C
YmtS_Ross
Motif
Other DBs
NCBI-ProteinID:
AMD95510
LinkDB
All DBs
Position
1697056..1698234
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AA seq
392 aa
AA seq
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MSENKNKLKNSLANFIKETRKQKVASYEEINSTLPADYPPEKIEQLIKKLTDDGVRIVNT
LKEKNELLKVPKTMEEIKKMEVSDFEDGNDEFVENEIDENEVDKLLQADLIKMAESMDVD
EPIKMYLREIGQIPLLSYEEEIEYAQKVLNGDEEAKQKLIESNLRLVVSIAKKHTNRGLK
MLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETI
NKIKKESRIILQETGKEPTAEELSKKLELPVEKVKNILEMNQDPISLETPVGSEEDSELG
DFVEDDKFANPYDATTRVLLKEQLDDVLKTLNEREEMVLRYRYGLDDGSQKTLEEVGKIF
NVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacaaaaataaattaaaaaacagtctcgcaaattttataaaagaaacaaga
aagcagaaagtagccagttatgaagaaattaattccactttaccagcggattatccacct
gaaaaaattgaacagttaataaaaaaactaactgacgatggtgtccgaatagttaatacg
ctaaaagaaaaaaatgagttgctaaaagttccaaaaactatggaagaaataaaaaaaatg
gaagtttctgactttgaagacggaaatgatgagtttgtggagaacgaaatagatgaaaat
gaagtggacaagttactacaggcagatttaattaaaatggctgaaagtatggatgtggac
gaaccaattaaaatgtatttacgtgaaattggacaaataccacttttaagttatgaagaa
gaaatagagtatgcacagaaagttttaaatggagatgaagaagcgaaacaaaaattaata
gaatctaatttgagattagtggtgagcatagccaaaaaacatactaatcgaggtctaaaa
atgctagatttaattcaagaggggaatatgggacttatgaaagctgttgaaaaatttgag
tatgaaaaaggattcaaattttcaacttacgcgacttggtggataagacaggcaataaca
agagcgattgctgaccaaggaagaacaataagaatacctgttcatatgatagaaacaatt
aataaaataaaaaaagaaagtagaattattttgcaggaaactggaaaagaaccgacagct
gaagaattgtcaaaaaagttggaattaccagttgaaaaagtaaaaaatatacttgagatg
aatcaggaccccatttctttggaaactcctgtaggaagtgaagaagatagtgaattaggt
gattttgtggaagatgacaaattcgcaaatccatatgatgcgacaaccagagtactttta
aaggaacagcttgacgatgttctaaaaacattaaatgaaagagaagagatggtacttaga
tatagatatggcttagatgatggttcgcaaaaaacattggaagaagtcgggaaaattttt
aatgtaacaagagagagaataagacaaattgaagtaaaagcattaagaaaattaagacat
ccaagcagaagaaaaaaattagaagattataggagctag
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