Leptotrichia sp. oral taxon 847: AXF11_09020
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Entry
AXF11_09020 CDS
T04653
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF11_09020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lot03019
]
AXF11_09020
Messenger RNA biogenesis [BR:
lot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXF11_09020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
YfbR-like
Cellsynth_D
Motif
Other DBs
NCBI-ProteinID:
AMD95703
UniProt:
A0A109W7V2
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All DBs
Position
1915985..1917565
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AA seq
526 aa
AA seq
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MNITIVILILLIVIFSFLAFLVAYFWGSSVFKKKYGELSELELRIVDVKRRLVTSKREVE
REIESFRKEETLKVKEELLNEKKIADDEIKKIKSELAVKEERIVKKEETLETKMERLEEK
ELRNEKYRDRLARKEKELDEMILSQEKELERISELTQDDARKIILEKLENELDHDKAVLI
RDYEHNLDREKDRISKRIISTAIGKASADYVVDSTISVIQLPSEEMKGRIIGREGRNIRA
IEAATGVDLIIDDTPEAVVLSSFDGVRREIARIALEKLISDGRIHPTKIEEVVAKAQLEV
EESVLEAAEQAILEVGIPTLPREVLKVFGRLKFRTSFGQNILQHSIEVAHIAAALAAEIG
ANVDVAKRAALLHDIGKAFSHEQEGSHALNGGEFLRKFSKESEIVINAVEAHHNEVEQLS
IEAVLVQAADSISASRPGARRETLSNYLKRLEQLEEIANSHEGIETSYAIQAGRELRLIV
HPDNVDDDKATILARDVAKDIEEKMQYPGQIKVTVIRETRAVEYAK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaacataacaatagtaatacttattttattaattgttattttttcttttttagctttt
ctagtagcttatttttggggaagttcggtatttaaaaaaaagtatggggaattaagcgaa
cttgaactaagaatagttgatgtcaaaagaagacttgtaacgtcaaaaagagaagttgaa
agagaaattgagtcttttagaaaagaagaaacattaaaagtaaaagaagaattgttaaac
gagaaaaaaatagcagatgatgaaataaaaaaaattaaatcagaattagctgttaaagaa
gaaagaattgtaaaaaaagaagaaacattagaaacaaaaatggaaagactggaagaaaaa
gaattaagaaacgaaaagtatcgggacagacttgcaagaaaagaaaaagaactggatgaa
atgattttgagccaagaaaaggaattggagcgaatttcagaacttactcaggatgatgca
agaaagattatattagagaaattagaaaatgaattggatcatgataaagcagtgctaata
agagattacgagcataatttggacagggaaaaagatagaatttccaaaagaataatttct
actgcaataggaaaagcatcggctgattatgtcgtggattcaacgatttcagtgatacag
ctacctagtgaagaaatgaaaggtagaattatcggaagagaaggtcgaaatataagagca
attgaagccgcaactggagtggatttgataattgatgatacgccagaagctgttgtactt
tcttcgtttgatggagttagaagagaaattgctagaattgcattagaaaaattgatttca
gatggaagaatccatccgacaaaaattgaagaagttgtggcaaaagcacagctagaagtg
gaagaaagtgtgctagaagcagcagagcaagcaattttagaagttggaattccaactctt
ccgagagaagtattaaaagtatttggaagactgaaattcagaacgtcatttggacaaaat
attttacagcattcgatagaagtagctcatatagcagctgcacttgcagcagaaatcggt
gcaaatgtggatgtagctaaaagagcagctcttcttcacgatataggaaaagcgttttca
catgagcaggaagggtcacacgcattaaacggtggggaatttttaagaaaattttctaaa
gaaagtgaaattgtcataaatgcagttgaagctcatcacaatgaagttgagcagctaagt
atagaagcggtgttagttcaagcggctgattctatttctgcgtcaagaccaggagctaga
agagaaacattgtccaattatttaaaacgattagagcagttagaagaaatagcaaacagt
cacgaaggaattgaaacttcatacgctattcaagcaggaagagaacttagattaattgtt
catcctgacaatgttgatgatgataaagctacaattttggcaagagatgttgcaaaagat
atcgaagaaaaaatgcagtatccaggacagataaaagtaacggtaataagagaaactaga
gcggtagaatatgcaaaatag
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