Leptotrichia sp. oral taxon 847: AXF11_09420
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Entry
AXF11_09420 CDS
T04653
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF11_09420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lot03019
]
AXF11_09420
03016 Transfer RNA biogenesis [BR:
lot03016
]
AXF11_09420
Enzymes [BR:
lot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXF11_09420
Messenger RNA biogenesis [BR:
lot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF11_09420
Transfer RNA biogenesis [BR:
lot03016
]
Prokaryotic type
tRNA degradation factors
AXF11_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
AMD95772
LinkDB
All DBs
Position
1997276..1999396
Genome browser
AA seq
706 aa
AA seq
DB search
MFDEKICEFNLGRQKIKISTGKIARQAGGSVVISCGGTVLLVTATRSKDVKEGQDFFPLT
VDYIEKFYASGKFPGGFIKRETKPGTDEILISRLIDRPIRPLFPEGFLNAVHIVITVISY
DEINFPENLATIGVSMALGLSDIPFAGEVAGVTVGYIDGEYILNPTAEELLESEIQLSVA
GTKEAVTMVEAGAREVSEEVMLEAIMFGHEKIKEICLEQEKFLSQFDVKKYEFEKKEVPS
EIKQFVDSFENEVENAIMTPGKLEKYEAIDNLEAELFEKYLEKLENEGNEDLQDKEALKD
LEKAFKGYYRDVEKKLVRNAILYKKYRADGRTTTQIRPLDVEIDTLPVPHGSALFTRGET
QALVVATLGSKEDEQIIDGMEDESRKKFFLHYNFPPYSVGEAGFMRAPGRRELGHGNLAE
RALKYVMPDEETFPYTVRLVSEITESNGSSSQATICGGSLALMAAGVPIKSTVAGIAMGL
IKEGETFTVLTDIQGLEDHLGDMDFKVAGTRNGITAIQMDIKIEGITREIMEIALKQALD
GRMFIIDKMEQVISKPRPEVAKNAPKIEIFKINPDKIAGLIGPGGKNIRAIIDETGVSID
IEDDGKVSIFGNDTEKMARALELVKLQTQSVELNEVYEGKVTKIMKFGAFVEILPGKEGL
LHISEISDKRIAKTEDALKEGDIVRVKVISIENEDKFNLSIKALNN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgaaaaaatatgtgaatttaatttaggaagacaaaaaataaaaataagtaca
ggaaaaatagctagacaagcaggaggttctgttgtgataagttgcggcggaactgtactt
ttggttacggcgacaagaagtaaagatgtgaaagagggacaggatttttttccacttact
gtggattacattgaaaagttttacgcttccggaaaatttccgggtggatttataaaaaga
gaaactaaaccaggaactgatgaaatcttgatttcaagacttattgacagaccgattaga
ccgctgtttccagaaggatttttaaatgcagtgcacattgtaattacggttatttcttat
gatgaaattaattttccagaaaatttggcgactattggagtgtcaatggcgctaggattg
tcagatataccgtttgcgggagaagtcgctggagttacagtcggatacattgatggagaa
tatattttaaatccaactgctgaagaacttttggaaagcgaaattcaactttctgttgca
ggaactaaagaagcggtaacaatggtagaagcaggtgcaagagaagttagtgaagaagtg
atgttagaagcgataatgtttggacacgaaaaaattaaagaaatttgtcttgaacaagaa
aaatttttgtctcaatttgatgtgaaaaaatacgaatttgagaaaaaagaagttccatct
gaaataaaacaatttgttgactcatttgaaaatgaagtggaaaatgcgattatgactcct
ggaaaattggaaaaatatgaagcaattgacaatttggaagctgaattgtttgaaaagtat
ttagaaaaattggaaaatgaaggaaatgaagatttgcaagataaggaagctttgaaagat
ttggaaaaagcttttaaagggtactatagagatgttgagaaaaagttggtaagaaatgct
attttgtataaaaagtatagagcagatggaagaactacaacacagattagaccgcttgat
gtagaaattgacacacttcctgtgccacatggttcagctttgtttacaagaggagaaaca
caggcacttgttgttgcaacacttggaagtaaagaagatgaacaaattatagacggaatg
gaagatgaaagtagaaaaaaatttttcttacattacaatttcccaccgtattcagttgga
gaagcagggtttatgagagcacctggccgtcgtgaattaggacacggaaacttggctgaa
agagcactaaaatatgtgatgccagatgaagaaacgtttccttacacagtgagattagtt
tcagaaattacagaatctaatggttcatcttcgcaagcaactatttgcggcggttcactt
gcactgatggcagctggtgttccaattaaatcaacggttgcaggaattgcgatgggactt
ataaaagagggggaaacatttactgtattaactgatattcaaggtttggaagaccatttg
ggagatatggactttaaagttgccggaactagaaatgggattacggcaattcaaatggat
ataaaaatcgaaggaattactagagaaataatggaaatcgcgctaaaacaagctttggat
ggaagaatgttcattattgataagatggagcaggtgatttccaaaccaagaccagaagtt
gctaaaaatgctccaaaaatagaaatatttaaaattaatcctgataaaattgcaggactt
attggacctggtgggaaaaatataagagcgattattgatgaaactggagtttctattgat
attgaagatgatggaaaagtatcaatttttggaaatgatactgaaaaaatggcaagagct
ttagaacttgtcaaacttcaaactcagtcagttgaattaaacgaggtttacgaaggaaaa
gttacaaagattatgaaatttggagcttttgtggaaattttgccaggtaaagaaggactt
cttcatatttctgaaataagtgataaaagaattgctaaaacagaagatgcgttaaaagag
ggagatattgtaagagtaaaagtaatttcgattgaaaatgaagataaatttaatttgagt
atcaaagcattaaataattaa
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