KEGG   Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_02058
Entry
lpa_02058         CDS       T01232                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
lpa  Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Pathway
lpa03030  DNA replication
lpa03430  Mismatch repair
lpa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    lpa_02058 (holB)
   03430 Mismatch repair
    lpa_02058 (holB)
   03440 Homologous recombination
    lpa_02058 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpa03032]
    lpa_02058 (holB)
   03400 DNA repair and recombination proteins [BR:lpa03400]
    lpa_02058 (holB)
Enzymes [BR:lpa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     lpa_02058 (holB)
DNA replication proteins [BR:lpa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     lpa_02058 (holB)
DNA repair and recombination proteins [BR:lpa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     lpa_02058 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C
Other DBs
NCBI-ProteinID: ADG24727
LinkDB
Position
1608509..1609414
AA seq 301 aa
MITYQEQWQKMQMALAIRRIPQAMLFLGSLHCGLIEFTNQVIKLLLCKIKQNEPCLTCMD
CQMIERFEHPDVEWIKPERSGGIIKIDQIRGLQSTAFLTPQRTNHKFIIIESAESMNIAA
SNALLKILEEPAQHTIFILLAQQIGNIPPTVLSRCQITQFAVFDELPCNNLLALGEYYTR
ELNSTMVFKHSESILEGLIAIIERREHPCTLAAQWIQHELSAFLWFLYLLYSQLQYMHLF
RVAYSGTLTKQLNKLSSLLNPVMIFAQVDKINTLLRKLSHNMNMNHTLVLEDLLFSLVVD
Y
NT seq 906 nt   +upstreamnt  +downstreamnt
atgattacttatcaagaacaatggcagaaaatgcaaatggccttggcgataagacgaatt
cctcaagccatgctatttttgggttctttgcattgtggtcttatagaatttacaaatcaa
gtgatcaaattactcttgtgtaaaataaaacagaatgagccttgtttgacttgcatggat
tgccaaatgatagagcgttttgagcatccggatgtggaatggattaagcctgaaagaagc
ggtggtattattaaaattgatcaaattaggggattgcagagtacggcgtttctaacacca
cagaggactaatcataaatttataattatcgaatcagctgaatcaatgaatattgcggca
tcaaatgccttattgaaaattctggaagagccagcgcaacatactatctttattttgtta
gcgcaacaaattggcaatataccacccaccgtattgagccgatgccaaataacgcaattt
gctgtttttgatgagttgccttgcaacaatttattggctttaggagagtactatactcgg
gaattgaatagcacaatggtcttcaagcattcagaatctattttagaaggcttgattgca
attattgagcgaagagagcatccatgcactttggctgcacaatggattcaacatgaatta
agtgcttttttgtggtttttatatttgctctattctcaactacagtatatgcatttgttt
cgagtggcttattctggtacgttaacaaaacaattgaataagctatcctcattactcaat
ccggttatgatttttgcccaagtagataaaatcaatactttgttaagaaaattaagccat
aatatgaatatgaatcatacattggtcttggaagatttattattttctttggttgttgat
tattaa

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