Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_03159
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Entry
lpa_03159 CDS
T01232
Name
(GenBank) replication factor C subunit
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lpa
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpa03016
]
lpa_03159
Enzymes [BR:
lpa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
lpa_03159
Transfer RNA biogenesis [BR:
lpa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
lpa_03159
Prokaryotic type
tRNA splicing ligases
lpa_03159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ADG25534
LinkDB
All DBs
Position
complement(2574383..2575813)
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AA seq
476 aa
AA seq
DB search
MDLSLLKKINDFEWQIPQHGKMLVPGVIFASEQLILDMDMKVYEQLSNVATLPGIVSAAY
AMPDAHWGYGFPIGGVAAFDPDDGGVISAGGVGFDISCGVRLLSTGLKRDELESVKVSLA
DALFTHIPAGVGSRSGIHLTIKQLDDMMRGGAQWAVKQGYGEVADLERIEDRGCVEGAIP
DFVSEQAKKRQKNEMGTLGSGNHYLEVQEVRQIYCSDTATALNLHEGDIVVSIHCGSRGL
GHQIGTDYLRSMVIESQHYGIKLADRELACAPIHSKLGENYLGAMRAGINCALANREIIT
HFMRNVFQDILPRTQIDLIYDVSHNTCKEEFHEIDGKKKRLFVHRKGATRALGPGHPQLP
KAVSHIGQPVIIGGSMGTGSYVLAGVKGSEHKSFSSACHGAGRAMSRHQAMKKWNGKDIV
DKLAQQGILIRSGSYRGVAEEAPGAYKDVHSIVDAAEMSGLAKKVAKLIPIICVKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagtctcttgaaaaaaataaatgattttgaatggcaaataccgcaacatgga
aagatgttggtgccaggagttattttcgcttcagaacagctgattcttgatatggatatg
aaagtttacgaacaattatctaatgttgctactttgccgggaattgtttctgctgcatat
gccatgcctgatgcgcattggggatatggttttccgattggcggtgtcgctgcttttgat
ccggatgatggaggggttatttcagcaggtggtgtgggctttgacatttcatgcggagtg
aggctcttatctactggattgaagcgagatgaattggagtctgttaaagttagccttgca
gacgctttatttactcatattccagctggagtaggtagtagaagcggcattcatttaact
atcaaacagctcgatgatatgatgcgaggaggcgcacagtgggcagtaaaacaaggctat
ggcgaagtcgctgatttagagcgtatagaggatcgcggttgtgtggaaggagctatccct
gattttgtctctgagcaagctaaaaagcgccagaaaaatgaaatgggtaccttgggttca
ggtaatcattatcttgaggtgcaggaagtcaggcaaatctactgttccgatacagcaacg
gctttaaatttgcatgaaggggatattgtagtgagtatccattgtggttccagaggatta
gggcatcaaattggtacagattacctccgttccatggttattgaatcacaacattatggt
atcaagctggcggatagggagttggcttgtgctcctattcattcaaagctaggggaaaat
tacctgggcgctatgagagcaggaataaattgcgctttagccaacagagaaatcatcact
cattttatgcgcaatgtgtttcaggatattttaccccgcactcagattgatctaatctat
gatgtttctcacaatacttgtaaagaagaatttcatgagatagatggcaagaaaaagcgc
ttatttgttcatcgaaaaggagcaactcgtgccttgggtccaggtcacccacaactacct
aaagctgtttctcatataggtcaacctgtgattattggagggagtatgggaacaggctcc
tatgtattagcaggagtcaaaggttctgagcataaatcttttagctcggcatgtcatgga
gcaggtcgcgctatgagtcgtcatcaggcgatgaagaaatggaacgggaaagacatagta
gataaattggctcaacaagggattttaattcgtagtggatcataccgtggggttgctgag
gaagctccaggagcttataaagatgttcattctattgttgatgccgctgaaatgtcgggt
ttggcaaaaaaagttgctaaattaattcccatcatttgtgtcaaaggttaa
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