Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_03291
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Entry
lpa_03291 CDS
T01232
Symbol
cafA
Name
(GenBank) Ribonucleases G and E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lpa
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Pathway
lpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpa_03291 (cafA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpa03019
]
lpa_03291 (cafA)
03009 Ribosome biogenesis [BR:
lpa03009
]
lpa_03291 (cafA)
Enzymes [BR:
lpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
lpa_03291 (cafA)
Messenger RNA biogenesis [BR:
lpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lpa_03291 (cafA)
Ribosome biogenesis [BR:
lpa03009
]
Prokaryotic type
rRNA processing factors
lpa_03291 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
KH_1
Motif
Other DBs
NCBI-ProteinID:
ADG25631
LinkDB
All DBs
Position
2681796..2683787
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AA seq
663 aa
AA seq
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MEKMLINAMQTEEIRVALIKNNQLFDLDIECPGEIKKKGNIYKAIVTRREPSLDAVFVEY
GSKRQGFLPLKEIAPEYLSKNPEEFGDEKPPITSLIREGQELLIQVDKEERGNKGAALTT
FITLAGCYLVLMPNNPHSGGISRRIEGDERDELRETLNALTLPEDMGLIIRTAGVGKSLE
ELQDDLNMLCNQWQSIKEAYNSELAPCLIHQEGDVIIRSIRDNLRKSISEIIIDDQISYI
KAKQYIERVKPEFLPNLKLYNSSIPLFNFYQIESQIETAYQRQVMLPSGGALVIDRTEAL
VSIDINSAKATGGADIEATALNTNLEAADEIARQLRLRDLGGLVVIDFIDMSSSKNQREV
ENRLKEALQADRARIQVGRISRFGLLEMSRQRLRLSLGETAQEICPRCEGRGTVRSIQSH
GLSITRLIEEEALKEKTAEIQVQLPPEMATFIMNEKRNFIRDIEKRHGVSVVVIANPYMH
PPQYTITRLKEDNVGKSKKPSYSLIQQPEVHVPSSDKEPVSHDEPAVKSFAEHRVIKHPQ
TSFIKRLWTSLFGGHSVAHTVTQEPGKKHHRAQNQGKHASSKSSGGDKRQQGSNANRRRR
SGGGQQRSSSGNTNAAASTHQQRKKSNPNQQSHGGQQSNRSIPAKNEGNKKREAILAKEP
EEK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatgctaatcaatgcaatgcaaacagaagaaattcgtgttgcactaattaaa
aacaatcaattatttgatctggacattgaatgcccgggagaaataaagaaaaaaggtaat
atttataaagccattgtaacaagaagagaacccagccttgatgctgttttcgttgaatat
ggttccaaacgccaaggtttcttacccctaaaagaaatagcgcctgaatatttaagcaag
aatccggaagagtttggagatgagaaacctccaattaccagcctcatccgtgaaggtcaa
gaattacttatccaagtggataaagaagaaagagggaataaaggagcagcactgacaact
tttattaccctggcaggttgctacctggttttaatgcccaataaccctcattcgggcgga
atatcaagacgtattgaaggtgatgagcgtgacgaattacgcgaaacattaaatgcttta
accctccctgaagacatgggccttattattcgcactgcaggtgttggaaaaagtctggaa
gaactgcaagatgacttaaacatgctttgcaatcagtggcaatccatcaaggaagcttat
aattcagaactggcaccttgcctgattcatcaagagggcgatgtcattattcgttccatt
cgtgacaatttgcgaaaatccatcagtgaaattattattgatgatcaaatatcctatatc
aaagcaaaacaatacattgaacgcgtaaaaccagaatttttacctaatctaaaactctat
aacagcagcatccctctttttaatttctatcaaattgaaagccaaattgagacagcttat
cagcgccaggtcatgcttccttctggaggtgccttggtcatagatagaactgaagctctg
gtatcaattgatattaactcagccaaggctacaggcggtgccgatattgaagcgactgca
ttaaataccaaccttgaagcagctgatgaaattgctcgccaacttcgcctgcgtgattta
ggtggtttggtagttattgattttattgacatgagttctagtaaaaatcaaagagaggta
gaaaatcgactcaaagaagcactgcaggctgatagggccagaattcaagtagggcgaatt
tcacgctttggccttcttgaaatgtcaaggcaacgcctccgattatcattaggagaaact
gcccaggaaatttgtccacgttgtgaaggtagaggaactgtacgcagtatacagtctcat
ggcttatcaattacccgccttattgaagaagaggcgctcaaggaaaaaacagctgagatt
caagtgcaattgccaccagaaatggctacattcattatgaatgaaaaacgtaattttatc
agggacattgaaaaaaggcatggtgtcagtgttgttgttattgcgaatccttatatgcac
cctccacaatatacgattactcgcctgaaagaagacaacgtaggcaaatctaaaaaacca
agttactctttgattcagcaacctgaagtacatgttcccagcagtgataaagaacccgtg
tcacatgatgaacctgctgtgaaatcatttgccgaacacagggtcatcaaacaccctcaa
accagttttattaaacgattatggaccagtttatttggtggtcattcagttgcccacact
gtaactcaagaacccggtaaaaaacatcatcgtgctcaaaatcaaggtaaacacgcatcg
tcaaaaagctcaggaggcgacaaacgtcaacaaggcagcaacgcaaatcgtagacgtcgt
tcaggaggaggccagcaacgttcttcatcaggaaatacaaatgctgcagccagcacacac
cagcaacgaaaaaaatccaacccgaatcagcaaagtcatggtggccaacaaagcaatcgt
tcaatccctgcaaaaaatgaaggcaacaaaaaaagggaagccatactggctaaggagcca
gaggagaaatag
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