Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_04013
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Entry
lpa_04013 CDS
T01232
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lpa
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Pathway
lpa03030
DNA replication
lpa03430
Mismatch repair
lpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lpa_04013
03430 Mismatch repair
lpa_04013
03440 Homologous recombination
lpa_04013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpa03032
]
lpa_04013
03400 DNA repair and recombination proteins [BR:
lpa03400
]
lpa_04013
Enzymes [BR:
lpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lpa_04013
DNA replication proteins [BR:
lpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lpa_04013
DNA repair and recombination proteins [BR:
lpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lpa_04013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
AAA_14
ResIII
AAA_2
AAA_30
nSTAND3
AAA_19
AAA_assoc_2
PIF1
AAA_7
TsaE
DUF815
Rad17
AAA_24
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADG26147
LinkDB
All DBs
Position
3216809..3218479
Genome browser
AA seq
556 aa
AA seq
DB search
MSYLALARKWRPRTFSQLVGQEHINKALINALNQQRLHHAYLFTGTRGVGKTSVARILAK
ALNCEKGITSEPCLHCDTCVAIEQGRYIDLIEIDGASKTRVEDTRDLLDNIQYAPTNGRF
KIYLIDEVHMLSQHSFNALLKTLEEPPSHVKFILATTDPQKLPVTVLSRCLQFNLKHLPA
ELINQQLQLILQEERLDFEIQALDILAQAARGSMRDALSLLDQAITSCETKLLASDVKML
LGHTQQDYALLLLQALAKQEAPIMLVLSQQIIAEGGNFQYVLDEMLNYLHQITVYQCLGD
NNPLISPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYTFKPA
SHVTTPPLAFEQNNKTCSLIVDDNTPAQNPIGIEPIPVTKATDNTVAYHQTQSLSTDDKK
SANSGESMNCDWNDIIPQLKLSGLALNAIENAEFLGKKEREITLGVQKGHQSLFTPTAIN
RIETALAGYYKSPVKIILNSQDAVHASPAQQKEKATQEKQEQAEAALHADPVFQQLKQEF
SAELVKNSIVLLKDDL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagctatctggcacttgcccgtaaatggcgaccacgcacattttcccaactggttggc
caagagcatattaataaagcactgatcaacgcgctgaatcaacaacgtttgcatcatgct
tatctatttactggtactcgcggggtcgggaaaaccagcgtcgcccgtattttagctaaa
gccctcaattgtgaaaaaggcatcacctcagaaccatgccttcattgcgatacctgtgtt
gccattgagcaaggccgttatattgatctcattgaaatagacggagcctccaaaaccaga
gttgaagacacgcgagatttacttgacaacatacaatatgcaccgacaaatggccgtttt
aaaatttatctaattgatgaagtgcatatgctatcccagcatagctttaatgctttacta
aaaacattagaagaaccgccttcgcatgtgaaatttattctggcaacgactgacccacaa
aaattacctgttactgtcttatcgcgttgtttgcaatttaatctaaaacacttgcctgct
gagttgataaatcaacaattgcaattaattctccaagaggagcgcttggattttgaaata
caagcgctagacatattggctcaggctgcccgcggaagcatgcgcgatgcattaagttta
ttggatcaggccattaccagttgtgaaacgaaattgctggcaagtgatgtaaaaatgctc
ttgggacatacccaacaagattacgcgttgctgctcttgcaagccctggccaagcaagaa
gcgccaatcatgcttgtattaagtcagcaaattattgccgaaggagggaattttcaatac
gttcttgatgaaatgcttaactatctgcatcaaattaccgtatatcaatgcctgggcgac
aacaatccattaattagtccaaaagctgaaattaaagaattagcaaaacagttttcggcc
gaggacacacaattattctatcaaataggtattaagggacgtgaggagatgcatctcgcc
cctacgctggccattggctttaatatgaccatgctgcgcatgtatacctttaaaccagct
tctcatgtaacaacacctccattagcattcgagcaaaataataaaacatgctcactaatt
gttgatgataatacaccagcccaaaaccctattggaattgaaccaatacccgttactaaa
gcgacggacaacaccgttgcctatcatcagacccaatcattatcaacagacgataaaaaa
tctgccaactctggtgagtccatgaactgtgactggaacgacataataccacagttaaaa
ttatcgggtttagcacttaatgccatagaaaatgcagaatttcttggtaaaaaagagcga
gaaattacattgggagtacagaaagggcaccagtccttattcactcccacagcgattaac
cgaattgaaaccgcattggccgggtattataaaagtcccgtaaaaattattttaaacagt
caagatgccgtgcatgcctctccagctcaacagaaagagaaagcgacccaagaaaagcaa
gaacaagcagaggcagcattacacgctgacccggtatttcaacagttaaaacaagaattt
tcagcagaattggtcaaaaattctattgtcctgttaaaagatgacttataa
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