Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_04291
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Entry
lpa_04291 CDS
T01232
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lpa
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Pathway
lpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpa_04291 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpa03021
]
lpa_04291 (rho)
03019 Messenger RNA biogenesis [BR:
lpa03019
]
lpa_04291 (rho)
Transcription machinery [BR:
lpa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
lpa_04291 (rho)
Messenger RNA biogenesis [BR:
lpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
lpa_04291 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
ADG26354
LinkDB
All DBs
Position
complement(3429788..3431050)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQEMGVENTSRMRKQDIIFAILKAHALKGEDIHGDGVLEVLTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFGLRSGDTISGKIRPPKDSERYFALLKVDQIN
YDTPDSAKRKILFENLTPLFATERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIARSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLSPEELQRTWILRKILQSMDECDAIEFLLERMKNHKTNAEFFDAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattacctattgccgatctcgttaatatcgctcaagag
atgggtgtggaaaatacctcccgtatgcgcaagcaagacatcattttcgccatccttaaa
gcccatgctttaaaaggggaagacatccatggcgatggtgttttggaagttttgactgat
ggttttggtttcttgcgttccgctgatggctcctatctggcaggccctgatgacatttac
gtctctcccagtcaaatcagacgtttcggtcttcgttcgggggatactatttctggtaaa
atccgcccccccaaagacagcgaacgctattttgctttattaaaagttgatcaaattaac
tacgatacaccggatagcgcaaagcgtaagattttatttgaaaacttaactcccttgttt
gctaccgagcgcctggttatggagcaaggtaatggcagcacagaagatctcacggcaaga
gtagttgatttatgcgctcctttcggccgcggacagcgtggtttgatcgtgtcacctccg
aaagcaggtaagacattgatgttgcaaaacattgctcgctctatagaaaaaaattatcct
gaatgttatctcattgttttgctgattgatgaacgtcctgaagaagtaacggaaatgcaa
cgttctgtcaaaggggaagttgttgcgagtacttttgacgagcccgccaatcgccatgtc
caggttgccgaaatggtaatagaaaaagcaaaacgtctggttgagcataaacgtgatgtg
gttattctgctggattcgatcactcgcctggccagagcttacaatacggttgtaccggca
tcaggtaaagtactgactggtggtgttgatgcgaatgccctgcaaagacccaagagattg
tatggtgcggcacgtaacatagaagagggcggcagtttaactattattgcaacggctctg
gtagacacgggttccaaaatggacgaagtgatttacgaagagttcaaaggtacaggtaac
atggaaatccacttgagtcgtaatattgccgagagaagggttttccctgcgattaacatt
aatcgctctggtactcgccgtgaagatctcctgttgagtcccgaagaattacagcgcacc
tggatattgcgtaaaatcctgcaatccatggatgaatgtgatgcgattgaattcttattg
gaacgcatgaagaatcataagacaaatgccgaattctttgatgcaatgaagcgtcaggaa
taa
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