Pseudolactococcus paracarnosus: BHS01_02530
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Entry
BHS01_02530 CDS
T07227
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpaa
Pseudolactococcus paracarnosus
Pathway
lpaa03410
Base excision repair
lpaa03430
Mismatch repair
lpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHS01_02530
03430 Mismatch repair
BHS01_02530
03440 Homologous recombination
BHS01_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpaa03400
]
BHS01_02530
DNA repair and recombination proteins [BR:
lpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BHS01_02530
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BHS01_02530
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BHS01_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
TPP_enzyme_N
RPN6_C_helix
Motif
Other DBs
NCBI-ProteinID:
QDJ27507
UniProt:
A0A7L4WBC8
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All DBs
Position
489297..491522
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AA seq
741 aa
AA seq
DB search
MITPTYDWQLNSDEPTAEFIKLVKKQKLDTLTAKILWKRQIRTADALTSFLNPTLETLHD
PFLFYSMRRAVDRIRQAIEMQEIILIYGDYDADGMTSASIMKTALDEIGAESLVYLPNRF
TDGYGPNLDVYKYFIENEGVGLIITVDNGVSGHAAIAYAQENGCDVIITDHHSLPDNLPD
AYAIIHPQHPDGQYPFPDLAGCGVAFKVACALLEYIPSEMLDLVAIGTIADMMSLTDENR
TLVKFGLEILKNTERVGLEALIKIAGVDKHSLTEESIGFQIAPRLNALGRLDDPNPAIDL
LTGWDEAETQQIAEMIDQKNQERKEIVANMLVEAESQLDDSPVQFIYQSGWHPGVLGIVA
GQLVQKTGKPIVMLTEEAGILKGSARSIPAFDIFYALSAHHDLFIAFGGHAQAAGMTFEL
TNLPVVKQVVDAFIAYQKLDMSQKAPLVLDDTIALSDITLDTIKALGKVAPFGQDNPKPI
FLIEDYQVVQSRAMGQQNAHLKLKIQQDKTQLEAVYFGQGMAALEFEQAAPDLAVTLSVN
TWNGNTSVQLMVVDAKVNGSQLIDLRNQQHQTAIPDDASVFTNEVVEQANQSQVLVVEET
PYDKASFDRLKQMVTSKDFTAVYFKNSIKQTYYLTGGGTHEQFAKFYKTIYKYPEFDVRY
KLADLADYLKIPLILLVKMVQIFEELAFVNIKDGVMTVNKEAKKREISESPIYQDLQVLV
QIQSIFALSPVADIYEKLKEK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacctacctatgattggcagcttaattcagatgaacccacagctgaatttatt
aagttagtcaaaaaacaaaaattagatacacttacagccaagatcctttggaaacggcaa
atcagaacagcagatgccctaacaagctttttgaatccaacactagaaaccttacatgat
ccatttttgttttatagcatgagacgtgctgttgataggattcgccaagcaattgagatg
caagaaatcatcttaatttatggtgactatgatgcagatgggatgacaagtgcgagtatt
atgaaaacagcactcgatgagataggtgctgaaagcttggtttatctacctaaccggttt
acggatggatacggaccgaatttagatgtctacaaatactttatagagaatgagggtgtt
ggcctgatcatcactgttgataacggtgtttcaggccatgcagcgatagcttatgctcaa
gaaaatggctgtgatgtcatcatcactgaccaccattctctgcctgataacctacctgat
gcgtatgcaattatccatccgcagcatccagatggccaatacccattccctgacttggct
gggtgtggtgtcgcttttaaagtggcatgtgccttactagagtatattccgtcagaaatg
ttagacctggttgccattggtacgattgctgacatgatgtcattgactgatgaaaataga
acgctggtcaaatttggtctggaaattctaaaaaatacagagcgtgttggtctagaagcc
ttaatcaagattgcgggtgttgataagcatagcttgactgaggaatctatcgggtttcaa
attgcgcccagactaaatgcattaggtcgcctagatgatccaaatcctgcgattgactta
ttgacagggtgggatgaggcagaaacgcagcaaattgctgagatgatcgaccaaaaaaat
caagagcgtaaagagattgttgccaatatgttagtagaggcagaatctcagctagatgat
agtcccgtacagtttatttatcaatcgggctggcatccaggcgttcttgggatcgttgcc
ggtcaattagttcaaaaaactggtaagcctatcgtcatgttaacggaagaagcaggcata
ctaaaagggtctgccagatcgattccggcttttgatatcttttatgccctatctgcgcat
cacgacttatttattgcctttggtggccatgcgcaagcggcaggaatgacatttgaacta
acgaatttaccagttgttaagcaggtggttgatgcattcattgcgtatcagaaactcgat
atgtctcaaaaagcaccacttgttttggatgacacgattgcgctttctgatatcacgctt
gatacaattaaagcacttggcaaagtagcaccttttgggcaagacaatcctaaaccaatt
tttttgatagaagattatcaagtggttcaaagtcgtgcgatgggccaacaaaatgcacac
ctgaaactgaaaatccagcaagataaaacacagctagaagcagtttattttggtcaaggt
atggcagcacttgaatttgaacaagccgcacctgatctcgcggtaaccttatcagtaaat
acatggaatggcaatacatcagtacaattgatggtcgttgatgcaaaggttaatgggagt
cagctgattgatttgagaaatcaacaacaccaaacagcaattccagatgatgcatctgtg
ttcacaaatgaagtcgttgaacaggcaaaccagagccaggtattagtagttgaagagaca
ccttatgacaaagctagctttgataggctgaaacaaatggtaactagtaaggacttcaca
gcagtttattttaaaaatagtattaagcaaacctattacttgactggtggtgggacacat
gaacaatttgctaaattttataaaacgatttacaaatatccagaatttgatgtgcgatat
aaacttgctgatttggctgattatttgaaaataccgcttattttattagttaaaatggta
caaatttttgaagagttagcatttgttaacattaaagatggcgtcatgaccgtcaataaa
gaggcgaaaaaaagagagatatcggagagtccaatctatcaagacttacaagtgttagtc
cagatacaatcgatttttgcactgtcaccagtagccgatatttatgaaaaattgaaggag
aaataa
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