Pseudolactococcus paracarnosus: BHS01_08740
Help
Entry
BHS01_08740 CDS
T07227
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lpaa
Pseudolactococcus paracarnosus
Brite
KEGG Orthology (KO) [BR:
lpaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpaa03019
]
BHS01_08740
03009 Ribosome biogenesis [BR:
lpaa03009
]
BHS01_08740
Enzymes [BR:
lpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHS01_08740
Messenger RNA biogenesis [BR:
lpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHS01_08740
Ribosome biogenesis [BR:
lpaa03009
]
Prokaryotic type
rRNA helicases
BHS01_08740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QDJ28606
UniProt:
A0A7L4WEC1
LinkDB
All DBs
Position
complement(1786533..1787873)
Genome browser
AA seq
446 aa
AA seq
DB search
MQFTDFNFKPFINETLESIHFNTATPVQEKLIPIALEGRDIVGESKTGSGKTHTFLLPIF
QKINTEIDGVQAVITAPSRELATQIYNAAMAFTQFDDSIKISNFVGGTDKKRQIEKLGSS
QPHIVIGTPGRVMDLINAQALKTYTASIFVIDEADMTLDMGFLTEVDKIASTFDKKVQML
VFSATIPQKLQPFLKKYLNHPVMEKIATKTVISDTIDNWVFSTKGRGNNGAILEILQTLN
PYLAMIFANTKDRADELHSFLTNNGFKVAKIHGGVPPRERKRIMKAVQNLDYQYVVATDL
AARGIDIEGVSHIINDGIPRDLEFFVHRVGRTGRNGMGGTAITLYQPSDDAAILELEKTG
IKFTPKVIKDGEIVDSYDRDRRKKREKSREALDITMIGLVKKKKKHIKPAYKKKIGWEID
KQKTAKKRIEGRAQGRSERKAKRQSF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttacagattttaattttaaaccgtttattaatgagacattagagagtatacac
tttaacacagcaacacccgtacaagaaaaattgattccgattgcgcttgaagggcgtgat
attgtcggcgaatctaaaacaggttctgggaaaacccatacctttttattgccgattttt
caaaaaataaatacagaaatcgatggtgttcaagcggttattacggcaccttcaagagaa
cttgcgacgcaaatttataatgcagcgatggcatttacgcaatttgatgacagcatcaag
atttcaaactttgttggtggaacagataagaaacgtcaaattgaaaaattaggcagctcg
caacctcatatcgtgatcgggacacctggtcgcgttatggacttgatcaatgcacaagca
ctgaaaacttacacagcaagtatctttgttattgatgaagcggatatgacattagacatg
ggatttttgacagaagttgataaaatcgccagtacctttgacaaaaaagtacagatgctc
gttttctctgcaacgattccacaaaaattgcaaccttttcttaaaaaatatctcaatcat
ccagtcatggaaaaaattgcaacaaaaacagtcatcagtgatacgatcgataactgggtc
ttctcgactaagggtcgtgggaataacggcgctatcttagagattttgcaaacacttaat
ccctatcttgccatgattttcgctaatacaaaagaccgggcagatgaattacatagcttc
ttgaccaataatggctttaaagttgctaagattcatggtggtgtcccgccacgtgaacgt
aaacggatcatgaaggccgttcaaaatcttgactatcaatatgttgtcgcgacagattta
gctgcgcgtggtatcgatatcgagggtgtgagtcatatcatcaatgatggtattccacgt
gacttggaattctttgtccatcgtgttggtcggactggtcgaaatggcatgggtggtact
gcgattacgctttatcaaccatctgatgatgcagccattctggaacttgagaaaacaggt
attaaatttacaccaaaagtgatcaaagatggtgaaattgtagactcttatgatcgtgac
cgtcgtaaaaaacgtgaaaaatcaagagaagcgcttgatatcaccatgattgggcttgtt
aagaagaagaagaaacatatcaaaccagcttataagaaaaaaattggctgggaaattgac
aaacaaaagacagctaaaaaacggattgaaggtcgtgcacaaggccgttctgaacgtaaa
gcgaaacgtcaaagcttttaa
DBGET
integrated database retrieval system
