Pseudolactococcus paracarnosus: BHS01_08945
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Entry
BHS01_08945 CDS
T07227
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpaa
Pseudolactococcus paracarnosus
Pathway
lpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHS01_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpaa03019
]
BHS01_08945
03009 Ribosome biogenesis [BR:
lpaa03009
]
BHS01_08945
Enzymes [BR:
lpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHS01_08945
Messenger RNA biogenesis [BR:
lpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHS01_08945
Ribosome biogenesis [BR:
lpaa03009
]
Prokaryotic type
rRNA helicases
BHS01_08945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
Motif
Other DBs
NCBI-ProteinID:
QDJ28643
UniProt:
A0A7L4WGM2
LinkDB
All DBs
Position
complement(1830980..1832554)
Genome browser
AA seq
524 aa
AA seq
DB search
MKFTELGLSEDILSAVSKAGYETPTPIQEQTIMLALDGKDVIGQAQTGTGKTAAFGLPTL
DKIDINGGLQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVFGGASIDKQIKALKSGAH
VVVGTPGRMVDLIKRRALQLGDIETLILDEADEMLNMGFIDDLEFIIKATPTATRQTLLF
SATMPDAIKKIGVKFMKEPQHVKIVSKEMTSDLIDQYYVKTKEFEKFDVLTRLIDVQKPE
LAIIFGRTKRRVDEITRGLKLLGYRAEGIHGDLAQQKRLAVLRDFKNDNLDVLVATDVAA
RGLDISGVTHVYNYDITQDQESYVHRIGRTGRAGKSGLSITFVSNNEMGYLRAIERLTKK
EMKGMKPPTREEAYQASLAVAFDEIKRDLTDEKISAKLNKFDEDADKLLAEYDAKLLVSL
LLQAKVSDPDTRPKVDIAPEKPLPFNGEGGKGGGGGRGGNRGGGSRGRNDRRGGGGYNRD
KRSGGGRDRDDRNKKDYYKKDKQKVHPHATEKKPGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttggtttatcagaagacatcttatcagcagtaagtaaagctggt
tacgaaacaccaacacctatccaagaacaaacaatcatgcttgccttagatggtaaagat
gtgattggtcaagcccaaactggtactggtaagacagcagcctttggcctaccgacactc
gataaaattgatatcaatggtggcttacaagcgttggttattgcaccaactcgtgagcta
gctgttcaatctcaagaagaattgtttcgatttggccgtgacaaaggcgttaaagtacgt
tcagtctttggtggtgcaagtattgataaacaaattaaagcacttaaatctggtgcacat
gtcgttgttggtacaccaggacgtatggttgacttaatcaaacgtcgtgccttgcaactt
ggggatatcgaaacattaatcctcgatgaagcagatgaaatgcttaacatgggctttatc
gatgaccttgagttcatcatcaaagcgacaccaacagcaacacgtcaaacactcttgttc
tcagcaacaatgcctgatgcaatcaagaaaatcggcgtgaaattcatgaaagaaccacaa
cacgttaaaatcgtatcaaaagaaatgacttctgatttgatcgatcaatactacgtgaaa
acaaaagaatttgaaaaatttgatgttttaacacgtttaatcgacgtacaaaaaccagaa
ttagcaatcatctttggtcgtacaaaacgtcgtgttgatgaaattacacgtggtttaaaa
cttctcggctaccgtgctgaaggtattcacggtgatttagcacaacaaaaacgtttagca
gtattgcgtgactttaaaaatgataacttagatgtactcgttgcgactgacgttgcagca
cgtggtcttgatatctcaggcgtaacacacgtttataactacgatatcacacaagatcag
gaatcatacgttcaccgtatcggccgtactggtcgtgctggtaaatcaggtctatcaatt
acgtttgtatctaacaacgaaatgggttacctacgtgcgatcgaacgtttgactaagaaa
gaaatgaaaggcatgaagccgccaacacgtgaagaagcttaccaagctagcctcgctgtt
gctttcgatgaaatcaaacgtgatttgactgatgagaaaatctcagctaaattaaacaaa
tttgatgaagatgctgataaattacttgcagaatacgatgctaaactattagtttcattg
ttacttcaagctaaagtcagtgatcctgatacacgtcctaaagtggatatcgcacctgaa
aaaccattaccatttaacggtgaaggtggcaaaggtggcggcggaggccgtggtggtaat
cgtggcggcggtagtcgtggtcgtaatgatcgtcgtggtggcggtggttacaaccgtgac
aaacgcagcggtggtggtcgcgatcgtgatgaccgtaacaaaaaagattattacaaaaaa
gataaacaaaaagtacatcctcatgcgactgaaaagaaacctggtttcgtcattcgtaac
aagggtgataagtaa
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