Lacticaseibacillus pabuli: PQ472_00750
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Entry
PQ472_00750 CDS
T09936
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lpab
Lacticaseibacillus pabuli
Pathway
lpab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQ472_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_00750
Enzymes [BR:
lpab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PQ472_00750
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PQ472_00750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WDF82802
UniProt:
A0ABY7WRI9
LinkDB
All DBs
Position
138017..138910
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AA seq
297 aa
AA seq
DB search
MLIGANVSMSGKGMFPGAVAQAASYDATTLQFYVGAPQNTRRKDVSEMRIPEGLDAMQTA
DLSHLVIHAPYIVNLANAKDPEKWAFGVQFMREEVQRSDALQAYTMAFHPGAHVGAGAET
GIANLAKGLNEFITADQHVTIALETMAGKGTEIGRTFEELAAIIDQVDQQDKVMVTMDTC
HMSDAGYAVRDDFDGVLNEFDHVIGLDKLAAIHINDSVNEQGAHKDRHANIGAGTIGFDA
LEKIVNHPQLAAIPKILETPFVGPDKKHMHAPYGVEIGWLTSGNYQPEQLTALAQQD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaattggagcaaatgtcagtatgtcgggtaagggaatgtttcctggtgccgtggcg
caggccgcgagctatgatgccaccacgctacagttttacgttggtgcgccacagaacacg
cgacgcaaggacgttagcgagatgcggattcccgagggccttgatgccatgcaaacggct
gacttgagccacctggtcatccacgcaccttacattgtgaacctggcgaatgccaaggac
cccgagaagtgggcgtttggggtgcaattcatgcgtgaagaagtccaacgctctgatgca
ttacaggcttacacgatggctttccaccccggtgcacatgttggcgcgggcgccgaaacg
gggattgcaaacctggctaaaggtctgaatgaatttatcaccgcggaccagcacgtcacg
attgcgctcgaaacgatggcgggcaagggcaccgaaattggccgcaccttcgaggaactg
gccgctatcatcgatcaggttgatcagcaggataaggtgatggtcacgatggacacctgt
cacatgagcgacgcggggtacgccgtgcgtgatgattttgatggggttcttaacgaattt
gaccacgtaatcggcctagataaactggcggcaattcacattaacgattccgtgaacgaa
caaggtgcacataaggaccgccacgccaacatcggggcgggaaccattggctttgacgcg
ctcgagaaaatcgtgaaccacccgcagttggccgcgattcccaagattctagaaacacca
tttgtcggcccggacaagaagcacatgcacgcaccatatggggttgaaattggctggctg
acaagtggtaattaccaaccggaacagctgaccgcactggcgcagcaggattag
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