Lacticaseibacillus pabuli: PQ472_02385
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Entry
PQ472_02385 CDS
T09936
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lpab
Lacticaseibacillus pabuli
Pathway
lpab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PQ472_02385 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpab03021
]
PQ472_02385 (rpoE)
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_02385 (rpoE)
Transcription machinery [BR:
lpab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PQ472_02385 (rpoE)
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PQ472_02385 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
WDF83101
UniProt:
A0ABY7WSJ6
LinkDB
All DBs
Position
522641..523222
Genome browser
AA seq
193 aa
AA seq
DB search
MKLDVFKDADKSELSMIEVAHAILAEKGDTMAFVDIANEIQEFLGKDDEEIRERLPQFYT
DLNVDGSFISLGDNVWGLRSWYPYESVDEEVNHPEEDETPARKKKPKRVNAFLADAGDDD
DIIDYNADDPEDDDLDADDDDDNYSADGNYGDNADSDDDDDSDDGDDQTDTLPDGIEGQL
SEFSDDDDDDDDE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacttgacgtatttaaagacgccgacaagagtgagttatccatgatcgaggtcgct
cacgcgatcctggccgaaaagggcgacacgatggcatttgtcgacatcgccaatgaaatt
caggagttcctgggcaaggatgacgaggagattcgtgaacggctgccacagttctacaca
gatctgaacgtcgacgggagcttcatctcgctcggcgataacgtctgggggctgcgttcc
tggtatccatacgaatctgttgacgaagaagtgaaccatccagaagaagacgaaacacca
gcccgtaagaagaagccaaagcgtgtcaacgccttcttggctgacgctggggatgatgac
gacattattgactacaacgctgacgacccagaagatgatgatctggacgccgacgatgat
gatgacaattacagcgctgacggcaactatggcgacaacgcggactccgatgatgacgac
gacagtgatgacggcgatgatcagacggacactttgccagacggtatcgaaggtcagctg
agtgaattcagtgatgacgacgatgacgatgacgacgagtaa
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