Lacticaseibacillus pabuli: PQ472_03540
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Entry
PQ472_03540 CDS
T09936
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpab
Lacticaseibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_03540 (radA)
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQ472_03540 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
ABC_tran
AAA_16
nSTAND_NTPase5
GvpD_P-loop
AAA_19
DUF7129
nSTAND3
AAA_22
AAA_24
RUBY_RBDX
AAA_14
Zn_ribbon_Nudix
NTPase_1
SLFN-g3_helicase
DAP3
NACHT
MCM
KTI12
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WDF83326
UniProt:
A0ABY7WT83
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All DBs
Position
792055..793440
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AA seq
461 aa
AA seq
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MAKAKTRYVCENCGYISASYLGRCPQCGTWNSLIEETIEPEQAASKPRVALSGEAIKPTL
LTKVTTEKEVRVKTKNAELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSGYLAKNHGT
VLYVSGEESASQIKMRAERLGVGDAGMYLYPETDMPSILAAVDELKPDYLIIDSVQTMNV
PTMNSAVGSVAQIREVTAELMRLAKGKGVTTFIVGHVTKEGAIAGPKILEHMVDTVLYFE
GDTDHTYRILRAVKNRFGNTNEIGIFEMRRDGLREVANPSEIFLEERLSGATGSAVVVSM
EGTRPILVEIQALLTPTVYGNAKRTSSGLDHNKVSLIMAVLEKRANLLLQNQDAYLKATG
GVKLDEPAIDLAIAVAIASSYRDTEIPAADCFVGEIGLTGEVRRVSRIEDRVKEAAKLGF
ERIYVPKNNLQGWKNESDIQVIGVTSVAEAMHRVFGTKKTK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaaacacgctatgtttgcgaaaactgtggctacatctctgcgtcgtac
ctgggccgttgcccgcagtgcggaacgtggaactcattaatagaagaaacgattgaaccc
gagcaggcggcgagcaagccacgcgttgcgctgagcggtgaggccattaagcccacctta
ctgacgaaggtcacgacagagaaggaagtgcgggtcaaaaccaagaacgcggaactgaac
cgtgtgcttggcggcggcattgtgccggggtcgctggttctgatcggtggggatcctggg
attgggaagtcgaccttgcttctgcaggtgtcgggctacctggctaaaaatcacggaact
gtcctgtatgtgtccggtgaagaaagtgccagtcagattaagatgcgggctgaacgcctt
ggcgtcggggatgcggggatgtacctttaccccgaaacggacatgccgagtatcttggcg
gccgttgacgaactgaagccagattacttgatcatcgattccgtgcagaccatgaacgtg
ccgacgatgaactcagcggtgggttcggtggcgcagattcgtgaagtgacggcagaattg
atgcgcctcgctaagggcaagggtgttacgacctttatcgtcggtcatgtgacaaaagag
ggtgccattgcggggccaaagattctcgagcacatggtggacaccgtgctttactttgaa
ggtgacacggatcacacctaccggattttgcgcgccgtaaagaatcgttttgggaacacg
aacgaaattgggattttcgaaatgcgacgtgatggcttgcgtgaagtggccaatccgtcc
gagattttcctggaagagcggctgagcggtgccaccgggtcggcggtcgtcgtctcgatg
gaagggacacggcccattctggttgagattcaagcactgctgacgccgacggtttacggt
aatgcgaaacgaacgagtagcgggctggaccacaataaggtgagcctcattatggccgtg
cttgagaaacgggcgaacctgttgctgcagaaccaggacgcctacttgaaggcgacgggg
ggcgtcaagcttgacgaacctgcgattgaccttgccattgccgtggcgattgccagctcc
taccgcgacaccgagattccggcggcggattgttttgttggtgaaatcggtttgactggt
gaagtacggcgcgtcagccgcatcgaggaccgcgtgaaagaggccgcaaagctcggcttc
gaacggatttacgtgcccaagaataatttgcaaggctggaaaaacgaatctgacatccaa
gtcattggtgtcactagcgttgcggaagctatgcaccgcgttttcggcacaaaaaagact
aaataa
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