Lacticaseibacillus pabuli: PQ472_05420
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Entry
PQ472_05420 CDS
T09936
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lpab
Lacticaseibacillus pabuli
Pathway
lpab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQ472_05420 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_05420 (priA)
Enzymes [BR:
lpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ472_05420 (priA)
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQ472_05420 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
Zn_ribbon_6
AAA_30
TrwB_AAD_bind
AAA_19
DUF5839
YrzO
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WDF83677
UniProt:
A0ABY7WXI7
LinkDB
All DBs
Position
1136968..1139259
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AA seq
763 aa
AA seq
DB search
MAYARIIVDVPTMQTNHPYDYLIPDNLADQVAPGKRVVVSFGKGTRQVMGMVVGMRDQTD
FDGEVKSVLRVLDDQPVISAELLALSKWLATDTFSFWISCLQTMLPNALKTESRRLNKQT
DETEIVNKGRIQTREYVRATKTAADYAALTTETRKNAKNQIKLLKILTELVGKDAVALQT
LSKQDKIPRATFTDAADKGWLAIEDHEYYRHPYAQLDDLPRTKPLHFTDEQQRAYDSVSQ
SVDQHLNDTYLLEGVTGSGKTEVYLQLIARTRQEGRDALMLVPEIGLTPQMVKRVKGRFG
SEVAVLHSGLSDGERYDEWRRIARGEAHIVIGARSAAFAPLQNLGLIVMDEEHETSYKQD
DTPRYHARDVLAWRAKYNHAPLLLGSATPSLESRARAEKGVYKRLLMPERTNNKPLPPVD
IIDMREAEVDSYSGDISNALTTALQTTMARGEQAVLMLNRRGFSSFVMCRECGYVAKCPN
CDISLTLHMDTHTLRCHYCGHEEAIPKICPSCKSRKIRYYGTGTEKVEQTLHQLFPDAGV
LRMDVDTTRKKGAHGRILKAFGDGKADILLGTQMIAKGLDFPNVTLVGVINADTALGLPD
FRASERTFQLLTQVSGRAGRADKPGRVLIQTFNPDNYAIQLAQRHDYERFFGLEMHMRHE
GNYPPYYFTFKLTVSHEEEDKAAKAIFKLADQLTANLSDQAIILGPTRGAIARVKRRYYY
QVVIKYKNEPNLQKTLADMLESTQMSSRSGYQIAFDREPLSFI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgctcggattatcgttgatgtcccaaccatgcaaacaaaccacccttatgat
tacctcatccctgacaatttggccgaccaggttgcacctggtaagcgcgtcgttgtcagc
tttgggaagggtacccgtcaggtgatgggcatggtcgttggcatgcgcgaccagactgat
ttcgacggcgaagtgaagtctgttctgcgtgtgctcgatgaccagcctgttattagtgca
gaattacttgccctctcaaagtggctcgcaacagacaccttttcgttttggattagctgt
ctgcaaaccatgctacctaacgcgctgaaaaccgaatctcggcgtctgaacaagcagacc
gacgaaactgaaatcgttaataagggccgcattcaaacacgcgaatacgtgcgcgccact
aagaccgccgcggattatgccgcattgacgacagaaacgcgtaagaatgcaaagaaccag
atcaagctactcaagattctgaccgagctggttgggaaggacgccgttgccctccagacc
ttaagcaaacaggacaaaattccgcgcgcgaccttcaccgatgccgcggataaaggctgg
ctggccattgaagaccacgaatactaccggcatccgtacgcccagctcgatgacttgcca
cggacaaagccgctgcacttcactgatgagcagcagcgggcttacgatagtgtgagccaa
tccgttgaccagcatttaaatgatacatacctgcttgaaggggtgactggctccggtaag
accgaggtttacctgcaactgattgcgcgcacacgccaagaagggcgcgacgccttgatg
ctcgtgcccgaaattggtctgaccccgcagatggtcaaacgcgttaagggccgctttggt
agcgaagtagccgtcctgcactctggcctgagtgatggtgaacggtatgatgagtggcgg
cgcatcgcgcgtggcgaggctcatattgtgattggcgcacgctcagcagccttcgcgcca
ttgcaaaatcttggcctgattgtcatggacgaagagcacgaaacaagctacaaacaggac
gacacgccacggtaccatgcacgcgacgtgctggcttggcgtgccaagtacaaccacgcg
ccattgttactggggtccgcgacgccgagtctggaatctcgggcacgcgctgaaaagggc
gtctacaaacgtctgctgatgcctgagcgcaccaacaacaagccattgccacccgtcgac
attattgacatgcgggaagcagaagtggactcctattctggagatatttctaacgcgctg
acgaccgctttgcagaccaccatggcacgcggggaacaggccgtactgatgctgaaccgg
cgcggcttctcgagctttgtgatgtgccgcgaatgtggttatgttgccaagtgcccgaac
tgtgatatctcgctgaccctgcacatggacacgcacaccctgcgttgccattactgtggc
catgaagaagcgattccgaagatttgcccaagttgcaaatcccgcaaaattcgctactat
ggcaccgggaccgaaaaggtggagcagaccttgcaccagctctttccggacgcgggtgtc
ttgcggatggacgtggacacaacccgcaaaaagggcgcgcacggccgcattctgaaggca
tttggggatggcaaggcggatattttgctcggcacccagatgattgccaagggactcgac
tttccgaacgtgacacttgttggcgttattaacgccgacaccgcgctgggcttgcctgat
tttcgggctagtgaacgcaccttccagttgctgacgcaggtgagtgggcgtgcgggccgt
gcggataagcccggccgtgtcctgattcagacctttaatcctgacaactacgccattcag
ttggcacagcgccacgattatgagcgtttctttggcctggagatgcacatgcggcatgag
gggaattacccgccgtattacttcacgttcaaattgaccgtcagccatgaggaagaggat
aaggcagctaaggccattttcaagttggccgatcagttgacggctaacctgtccgatcaa
gcgattatcctgggtcccacgcgtggcgccattgcgcgggtcaagcggcggtattattac
caagtcgtcattaaatataagaatgaaccgaacttacaaaaaacattagcagacatgctg
gaatccacgcagatgagtagtcggagtggataccaaattgcctttgaccgagaacctcta
tcatttatttag
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