Lacticaseibacillus pabuli: PQ472_05855
Help
Entry
PQ472_05855 CDS
T09936
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpab
Lacticaseibacillus pabuli
Pathway
lpab03410
Base excision repair
lpab03430
Mismatch repair
lpab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQ472_05855 (recJ)
03430 Mismatch repair
PQ472_05855 (recJ)
03440 Homologous recombination
PQ472_05855 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_05855 (recJ)
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PQ472_05855 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQ472_05855 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PQ472_05855 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDF83761
UniProt:
A0ABY7WUG1
LinkDB
All DBs
Position
1241763..1244042
Genome browser
AA seq
759 aa
AA seq
DB search
MNSRFDWQLGKQAEAGATAEVGRELGVSPLLAQLLVQRGITDKATWEKYTHPSLENLHDP
FALHDMDLAVARITKAVENGEQITIYGDYDVDGITSTTIMKEALESIGADPAIYIPNRFE
DGYGPNLTAYKRLAETGTQLLITVDNGVSGAEPIAWAMANGMDVIVTDHHELPDKLPDAV
AVVHPRYPGTDYPFGDLSGAGVAFKVATALLGEVPMESCDLAALGAIADVVSLTDENRTF
VQIGLQMMRENPRTGLQALFEVAGIDQATLDETTVGFAIAPRLNAIGRLGDATPGVKLLS
TFDPTEASRIAAEIDEENKKRQKLVSDIADEAEAMAISPDNQERAGLVLAGEGWHQGVVG
IVASRIVELTGKPTIILSVDSEKDEAKGSGRSVPSFHLFKGLQTCSELLDHFGGHAMAAG
MSLKASNIDAFREAFAKAAADFVNPNDRLPLAVDERVDASAITMANYEELQQLAPYGPDN
PQPVFTMAPNVIDGVKQIGQNGKHLRFRVDGGFGAIAFGMGNMAADLASAQKVKIAFTLG
LNTFRGNSSLQLEIKDIGLQQDQVLDWRGPSLETQQLMQTHNYAFFNARTMHAMQTRYTF
GGPVSLVSDLPAGAEDVVLVDMPANEAQLSAAMRSVALPVTVLFYASPAATVAVPSRAEF
GSVLHFIQKHPNFDKHKLGQLARETHMNLNQVILAVQVFLELNFVTIKSALISAVDSPAR
KQLSSAPAYQARQEELRLIKNLQTASRGDLRSTLLNYRR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttgaattcacgttttgattggcaattaggcaaacaagcagaggcgggcgcaaccgccgaa
gttggacgagaactgggtgttagcccactgctcgcccaacttttggtgcaacgcgggatt
acagataaagcaacttgggagaaatatacccaccccagcttagaaaatctgcacgacccg
ttcgcgcttcacgacatggatttggcggttgcccgcattaccaaagcggttgagaacggc
gaacaaatcacaatttatggggattatgacgtcgacggcatcacgagcacaaccatcatg
aaggaggcgctcgagagtattggtgccgacccagccatctacattccaaaccggtttgaa
gacggctacgggccaaatctgaccgcctacaaacgtttagctgagacaggcacccagttg
ctcattaccgtggacaacggggtcagtggggccgagccgattgcttgggccatggccaac
gggatggatgtcattgtcacggatcaccatgaactcccggacaaactaccagacgctgtt
gcagtcgtgcacccacgttaccccgggacggattacccatttggcgatttgagtggggcg
ggtgttgcgttcaaggtcgcgacggcgctgctgggtgaggtaccgatggagagctgcgat
ttagcggctttgggtgccatcgccgatgtggtgagtctgacggatgagaaccgcaccttc
gttcaaatcgggcttcagatgatgcgcgaaaatccgcgcacgggcttgcaggcattattc
gaagttgccggcattgaccaggcaacgctcgacgagacgacggttgggtttgccatcgcg
ccacgcctcaatgcgattggccgattgggggatgccacaccaggcgtgaagctactctcg
acctttgacccaaccgaagcaagtcggattgccgcagaaattgatgaggaaaacaaaaag
cgtcaaaaattagtatcagatatcgcggatgaggcagaagccatggcgatttcgccagat
aatcaggaacgcgccggactcgttctggcaggcgagggctggcaccaaggcgtggttggt
attgtcgccagccgcattgtggagctaacgggaaagccgaccatcattctctccgttgat
tcggaaaaagacgaggccaaagggagcggacggtctgtgccatcgttccacctcttcaaa
ggcttgcagacatgcagcgagttgctggatcactttggcggtcacgcgatggcggcgggg
atgagtctcaaggccagcaatattgatgctttccgcgaggcatttgctaaggcggcggcg
gactttgtaaatccaaacgaccgcctgccgctggcggttgacgagcgtgtggatgccagc
gccatcaccatggccaattatgaggagttgcaacaacttgcgccatacggtccggacaat
ccgcaaccggtcttcacgatggcaccgaacgtcattgatggggtcaagcagattggccaa
aacggtaaacacttacgtttccgcgtcgacggcggttttggtgcgattgcgtttggcatg
gggaacatggcggcggatttggcaagtgcccagaaggttaaaattgcgttcaccctgggc
ctcaacactttccgcggtaacagcagcttgcaacttgaaatcaaggatattggcctccag
caggatcaggtcctcgactggcgcggcccaagtctggaaacccagcaattgatgcagacg
cacaactacgcctttttcaacgcacgtacgatgcatgctatgcagacacgctataccttt
ggcgggccagtgagcctggtcagcgatttgccagcgggggctgaggacgtggtactggtc
gacatgccggccaatgaagcacagttgtcagccgcgatgcgcagcgtggcgcttcccgtc
acggtactgttctacgcgagccctgccgcgaccgtcgccgtaccgtctcgcgcagagttt
ggcagtgtgttgcacttcattcaaaagcacccgaactttgataaacataagttgggccag
ctagcgcgtgagacgcacatgaatctaaatcaagtgattttggctgtacaggtgttttta
gagctcaattttgttactataaagagtgctttgatttctgccgttgattcacccgcacgc
aaacaactgtctagcgcgccggcttaccaggcgcggcaggaagaattacggttgatcaaa
aacttgcagaccgccagtcgtggcgatttgcgcagtacattgcttaattaccgcagataa
DBGET
integrated database retrieval system
